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SCNpilot_expt_500_bf_scaffold_917_6

Organism: SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8

near complete RP 50 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: comp(3617..4201)

Top 3 Functional Annotations

Value Algorithm Source
TetR/AcrR family transcriptional regulator n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C249 similarity UNIREF
DB: UNIREF100
  • Identity: 45.5
  • Coverage: 178.0
  • Bit_score: 155
  • Evalue 6.00e-35
TetR/AcrR family transcriptional regulator {ECO:0000313|EMBL:AJA09576.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.4
  • Coverage: 183.0
  • Bit_score: 344
  • Evalue 9.80e-92
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 39.0
  • Coverage: 172.0
  • Bit_score: 107
  • Evalue 5.90e-21

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Taxonomy

Sphingopyxis fribergensis → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 585
ATGACGTCGACCCAAAAAACCAAAGAACAAGCTTCCGGACGAACAGGGAGGCCTACTCGACAAGCCTCGCAAGCACTTTCGAGGAAAATTCTCCGTGTCGCCCGCGATGTCTTCTTTGCCGACGGATTCGGTCGTTCAACGGCGGAACGGATTGCTGCAAAAGCAGGCATCTCCAAGCGCACTTTGTACGCCCGTTACGGGAGCAAAAAGCTGCTTTTCGAGGCGGTAATACTCAGGGAAATCGAGGATCGGCTCTCCTTCCTCGAACAGCACGTTCCCGAACATGGCGACGTTCGGCCCGAGCTTGAAGAGCTGTCCGATGAACTGCTATCCTGGATGCTTACCGACATTCATGTCGCGTTGGAACGCGTTGTAATGGCTGAGGCTGCACGTTTTCCCGCTTTAGCGCGAAACCTTTACGAATTCGGCGTAGGACGCACGACGAGATTGGTGGCAGAGGTTTTGCGCAAAGCCGAGGAGAGGGGAGAAATCAGGGTGTCAGACGCGAATTTTGCTGCGGAGCAGTTTATATCCAGCACCTTTTCGTCGGGCCGCTCTTGGAGTGGGAGTGACCAGTCACAATGA
PROTEIN sequence
Length: 195
MTSTQKTKEQASGRTGRPTRQASQALSRKILRVARDVFFADGFGRSTAERIAAKAGISKRTLYARYGSKKLLFEAVILREIEDRLSFLEQHVPEHGDVRPELEELSDELLSWMLTDIHVALERVVMAEAARFPALARNLYEFGVGRTTRLVAEVLRKAEERGEIRVSDANFAAEQFISSTFSSGRSWSGSDQSQ*