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SCNpilot_expt_500_bf_scaffold_917_11

Organism: SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8

near complete RP 50 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: 9444..11624

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQ60_SPHAL similarity UNIREF
DB: UNIREF100
  • Identity: 88.7
  • Coverage: 424.0
  • Bit_score: 772
  • Evalue 3.00e-220
Uncharacterized protein {ECO:0000313|EMBL:KJS26453.1}; TaxID=1629720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae.;" source="Hyphomonadaceae bacterium BRH_c29.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.9
  • Coverage: 750.0
  • Bit_score: 847
  • Evalue 1.30e-242
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 88.7
  • Coverage: 424.0
  • Bit_score: 772
  • Evalue 9.30e-221

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Taxonomy

Hyphomonadaceae bacterium BRH_c29 → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2181
ATGGGACGCAGAGCGAACCTTCTTTTCTGCACGGCCGCGATTTGGGTAGCCGTCGCTCCGCCTGCTTTCGCTCAAGACGCACCGTCCGAAGCTCTTCCGGACGCGGCTGAAGCGGATGATGACGGCGCCATAGTCGTAACGGCGCGCCGCCGCGAAGAGCGGCTGGCCGATGTGCCGACCGCGGCGTCGGTCATCGATATCACGTCGCTCACCGATCGCGGCGGCGCCACGGGCAGCGGCGAACTCCTCGCCGATCAGCCAAGCGTTCGCTTCAACAATCTGAACTCGTCCGTCACGTCGGAGATCTCGATCCGCGCTTCGTCGACCGCGCGTGCCACCAATGGCGACCCGAGCGTCGGGCTCTATCGCAACGGTGCCTATATCGCCGGCGGTCCGGTGGGCGGTCGCAACTTCACGCGGCTCGACCTGCTCGACATCGGCCGCGTCGAGGTTCTGCGCGGGACGCAGGGCGCGCTGTACGGCCGCAACGCGGTCGGCGGCGCGATCAATATCATCTCGGCCGAGCCCGAATTCGATCTCTCGGGCTGGGCGAGCGCGCGCTATGGCTTCGAGAACAACAGCTTCCAGACGCAGGGCGTGATCAATGTCCCGCTCGCCGATGGCCTGGCGATCCGCATCAGCGGCGATCTCGTCGAGCAGGACAAGGGCTTCTTCTACAATCCCGACAACGACGTCTATTTCGACCAGCAGAAGGGCCACGGACTGCGCGGCCAGATCCGGCTGAAGCGCGGGCCGGTCGACGCGATCATCACGGCCGAGACCCAGCGGCTGACCACGCCGACGATCCATTACCAGATATCCATTCCCGCGGGCACGCCAGGCTTTCCCGGCGGTTATACGCAGGATCGCTTTCGCTACCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACCTCCTTTCGCAAGCGCACGTCCGAATATGATCTCGACAATGACGCGATCAGCCCCGCCGAGCTGGCGCGTGCGCGCGCCGCGGGGCAGATCGGCGCTCTCACGCCGCTCGATGCCAGCACCGCGTCCTACGTCGTCGACACGACCGACAATTTTTCGCAGGATATTCATGTCAGCGGGGCGAGCGATCGCTTCACATGGCTGGTCGGCGCCGAAATGCTGTTGCTCGACAGCGATTTCTCGGTGGCGACGACGCGCACGCCGACGCTCGCCAATCCGTCGCCGGGCAATATCGCGCCCGCGCGGCTGCATTTCGAAAGCTATGCGGCCTATGGCTCGCTCGGTTTCGACATCACCGACAGCCTCAACCTGACCGGCGAACTGCGCTATACCCGCGACAGCCGGAGCATCTCGGCGCGGCTTTACGATTTGGGGACTGGCCTGCCCACCGGCGGGCCATCGCGGATCATCGACGACAGCATCAACGCCGACAATCTCTCCTACAATGCGACCCTCTCGTACAAGCTCACGTCGAACATCCTCGCCTATGGCAAGGTCGGCAGCAGCTATCGGGCCGGCGGGTTCAACACGCGCCTCTCCGATCCGCGCGCGCCGAGTCCTGTGCAGGTGCTGTTCGGCAACGAAAACAGCACGTCTTACGAAGTCGGCATCAAGGGCAGTCCGATCCGCCGCGGCTATTTCGCAATCGCGGGCTATTACACCGAGCTTGAAGACCTGATCGCGCAGGTCGACGATGGCTGCGCGCTCACCAATCCGGCGTGCCCGATCGCCGCGGTCGCCTATCTAACCAACGCAGGCGATGCGAAAAGCTGGGGTATCGAGGCCGAATATAGCCAGGGCTTCGATCTCGGCGAAGGCAATGGCCGCCTCGCCTTGAGTGGCTCGCGGCAAGAGGGCAAGGTCAAGAGCGGCCGCTATGACGGGCTGGACCTTGCGCAGGTTCCCGACTGGCTCGCCTCGGCCAACCTCAATCTGCGCTACCCGGTCACCAAGGATGTCGCGCTGACCAGCAATGTCCTGATCAGTGGTCAATGGGGCGGCAAACAGGAGCTGACAGCGACCTCGGTCGACCTCGATGATTATGTCCTCGTCAATCTTCGGGTCGGCGTCGACTTCGGCAAGATCAGCGTCAGCGCGTTCGCGAACAACGTCTTCGACAAGGTTTATTTCGTCGCGCAGGCGCCGACGATCAACCGGTACAGCCAGCCTCGCGTCGTCGGCGTCGAAGGACGCATTTCTTTCTAG
PROTEIN sequence
Length: 727
MGRRANLLFCTAAIWVAVAPPAFAQDAPSEALPDAAEADDDGAIVVTARRREERLADVPTAASVIDITSLTDRGGATGSGELLADQPSVRFNNLNSSVTSEISIRASSTARATNGDPSVGLYRNGAYIAGGPVGGRNFTRLDLLDIGRVEVLRGTQGALYGRNAVGGAINIISAEPEFDLSGWASARYGFENNSFQTQGVINVPLADGLAIRISGDLVEQDKGFFYNPDNDVYFDQQKGHGLRGQIRLKRGPVDAIITAETQRLTTPTIHYQISIPAGTPGFPGGYTQDRFRYPXXXXXXXXXXXTSFRKRTSEYDLDNDAISPAELARARAAGQIGALTPLDASTASYVVDTTDNFSQDIHVSGASDRFTWLVGAEMLLLDSDFSVATTRTPTLANPSPGNIAPARLHFESYAAYGSLGFDITDSLNLTGELRYTRDSRSISARLYDLGTGLPTGGPSRIIDDSINADNLSYNATLSYKLTSNILAYGKVGSSYRAGGFNTRLSDPRAPSPVQVLFGNENSTSYEVGIKGSPIRRGYFAIAGYYTELEDLIAQVDDGCALTNPACPIAAVAYLTNAGDAKSWGIEAEYSQGFDLGEGNGRLALSGSRQEGKVKSGRYDGLDLAQVPDWLASANLNLRYPVTKDVALTSNVLISGQWGGKQELTATSVDLDDYVLVNLRVGVDFGKISVSAFANNVFDKVYFVAQAPTINRYSQPRVVGVEGRISF*