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SCNpilot_expt_500_bf_scaffold_917_16

Organism: SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8

near complete RP 50 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: 16140..16661

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TrmB n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XDZ0_NOVAD similarity UNIREF
DB: UNIREF100
  • Identity: 68.8
  • Coverage: 144.0
  • Bit_score: 197
  • Evalue 1.20e-47
Transcriptional regulator, TrmB {ECO:0000313|EMBL:AJA09566.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 173.0
  • Bit_score: 331
  • Evalue 1.00e-87
transcriptional regulator, TrmB similarity KEGG
DB: KEGG
  • Identity: 68.8
  • Coverage: 144.0
  • Bit_score: 197
  • Evalue 3.90e-48

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Taxonomy

Sphingopyxis fribergensis → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 522
ATGATGTTGGCTCTACAGTCCATGACGATGGTTGAACCTCGCAATACAAGCGGCATCTCTCCCGCGAAAAGTCTTCTGACGGCCTCAGACGAGTTTGTCTTTCTCATCGAGGAAGTGCCCCGCAAACTGCGTCGGAAGTTTGATGCCTCAACGGCGCGCTTCGGATTGACGCGAACCCAGTGGCGCGCGCTCGTCTATATCTATCGGACCCCGGGCATGACCCAAACCGACCTCTCCAAATGCCTCGAACTGGAGCGTGCCAGCGTTGGCCATGTTGTCGACCAGCTGGAAAGAATGGTGCTCGCGGAACGGCGCGCTGCCAAGGGCGACCGGCGCGTCTGGGAACTTCATCTTTTGCCCCGAGCGATCGAAATCCTGCCTCAGCTGCGCGCCGAAGCCGACATGATCTACGCGCGACTGCTCCATATGATTTCCCCAACTGAGATACGCGCGATGCGCTCATTGCTGACGAAAATGTCCGGCAATCTCGAAAGCGGATCGGAAGACATGCCTCCTCGATAG
PROTEIN sequence
Length: 174
MMLALQSMTMVEPRNTSGISPAKSLLTASDEFVFLIEEVPRKLRRKFDASTARFGLTRTQWRALVYIYRTPGMTQTDLSKCLELERASVGHVVDQLERMVLAERRAAKGDRRVWELHLLPRAIEILPQLRAEADMIYARLLHMISPTEIRAMRSLLTKMSGNLESGSEDMPPR*