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SCNpilot_expt_500_bf_scaffold_917_18

Organism: SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8

near complete RP 50 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: 17697..18239

Top 3 Functional Annotations

Value Algorithm Source
Integrase n=1 Tax=Sphingobium lactosutens DS20 RepID=T0HH02_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 75.0
  • Coverage: 176.0
  • Bit_score: 261
  • Evalue 5.50e-67
ISCc3, transposase OrfB {ECO:0000313|EMBL:AJA09564.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 180.0
  • Bit_score: 366
  • Evalue 1.70e-98
transposase, orfB similarity KEGG
DB: KEGG
  • Identity: 76.1
  • Coverage: 155.0
  • Bit_score: 247
  • Evalue 2.60e-63

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Taxonomy

Sphingopyxis fribergensis → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 543
GTGTGGAACCGCATCTGCGATGATATCCAGCAGCAGATCATCGACATGGCGTTGGATACAACCGACCTGTCACCCCGCGAGCTCGCGGTGCGCTTCACCGACGAGAAGCGCTACTTCGTGTCGGAAGCCACGGTTTACCGTATGTTGAAAGCCCATGACCTGATCGCCAGTCCGGCCTTCATCGTGATCAAGGCCGCCGACGGGTTCCACACCAAGACGACGCGGTCGAACGAGATGTGGCAGACCGACTTCACCTACTTCAAGATCATCGGCTGGGGCTTGGTGTACCTGTCGACCGTGCTCGACGACTTCTCCCGTTATGTCATCCTTTGGAAGCTGTGTACCACCATGCGGGCCGGGGATGTCACCGACACGCTGGAGCTGTCCCTCGAAGCTTCCGGATGCGCGTCGGCCAGGATGATCCACAAGCCGAAGCTGCCAATGGGCCCGGCCAGCATATTGCCCGCGCCCCTTAATTCGTCAGGGAAATGGGCGGCGAGGAATTGCCGCATTTCGGTGCGAAATGCGTCTTCGCTCGTCTAG
PROTEIN sequence
Length: 181
VWNRICDDIQQQIIDMALDTTDLSPRELAVRFTDEKRYFVSEATVYRMLKAHDLIASPAFIVIKAADGFHTKTTRSNEMWQTDFTYFKIIGWGLVYLSTVLDDFSRYVILWKLCTTMRAGDVTDTLELSLEASGCASARMIHKPKLPMGPASILPAPLNSSGKWAARNCRISVRNASSLV*