ggKbase home page

SCNpilot_expt_500_bf_scaffold_917_21

Organism: SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8

near complete RP 50 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: 20138..20881

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator n=1 Tax=Henriciella marina RepID=UPI00036DA1BE similarity UNIREF
DB: UNIREF100
  • Identity: 88.6
  • Coverage: 245.0
  • Bit_score: 427
  • Evalue 1.00e-116
  • rbh
Regulatory protein GntR, HTH {ECO:0000313|EMBL:AJA09561.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 246.0
  • Bit_score: 473
  • Evalue 1.80e-130
regulatory protein GntR similarity KEGG
DB: KEGG
  • Identity: 85.7
  • Coverage: 237.0
  • Bit_score: 394
  • Evalue 2.40e-107
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingopyxis fribergensis → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 744
GTGATGCAACCGAAGGTCGATGATTCGAGGAAGGCCAAGCGTGCGCTCACGCTTGCGCAGGACATCGTACGCGATATCGAAGCCGGGGCGCATGTTGCGGGCGACAGGTTGGCGCGCGAGGACGAAATGCTTGCGCGATACGATGTCGCCCGAGCGACCTTGCGCGAAGCGCTTCGCTTCCTTGAACTCCAAGGCGTTATCCATCTTCAACTAGGTCGCGGTGGCGGGCCGGTGGTCGCTCGCCCGCAGACTGGCGATTTCGCAAACAGCCTCTCGCTGATCCTGCATTTCATGGAGGCGGACTTGAGGGGCTTGCTCGAATTGCGCGAAGCGATTGCGGCGGATGTTGCAGCCTATGCCGCCCAGCGCGCGACCACGGGTGATCTGAGCGCACTTGCCGATTGCCTCAAAGAGCTGGAGCGAAACGAAGCGAGCAGCCAGTTCGAGGAACTGAATCGCCGTTTTCACGATATGCTCGGCTGGGCCAGCGGCAATCCGCTTTTCGGCCTTCTGACTTCCGCGTTGCATATGCTTACCCGCGAATTCTCGCTCTCGCTGGGGTATTCGGCGCAAGAGCGTGCGGTCCAGTTGCGTTTCTTGCGCCGCGTCCTTGAAGCTGTGCGCAAGGGCGATGCCGAAGGAGCGCGGCAGGCTATGGCGCGTCTCGTGGCGGGCTCCGCCTCCTATCTCGCACAGAGAAGCCCTGAGCTTGTGTCCCAGAAGGTCAGGTGGGGACAGACGTAA
PROTEIN sequence
Length: 248
VMQPKVDDSRKAKRALTLAQDIVRDIEAGAHVAGDRLAREDEMLARYDVARATLREALRFLELQGVIHLQLGRGGGPVVARPQTGDFANSLSLILHFMEADLRGLLELREAIAADVAAYAAQRATTGDLSALADCLKELERNEASSQFEELNRRFHDMLGWASGNPLFGLLTSALHMLTREFSLSLGYSAQERAVQLRFLRRVLEAVRKGDAEGARQAMARLVAGSASYLAQRSPELVSQKVRWGQT*