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SCNpilot_expt_500_bf_scaffold_1486_8

Organism: SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8

near complete RP 50 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: 5788..6612

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.0
  • Coverage: 274.0
  • Bit_score: 524
  • Evalue 9.70e-146
shikimate 5-dehydrogenase; K00014 shikimate dehydrogenase [EC:1.1.1.25] similarity KEGG
DB: KEGG
  • Identity: 86.5
  • Coverage: 274.0
  • Bit_score: 476
  • Evalue 5.20e-132
  • rbh
Shikimate dehydrogenase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WG67_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 96.0
  • Coverage: 274.0
  • Bit_score: 524
  • Evalue 6.90e-146
  • rbh

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 825
ATGACCGCTGCCGATTCTGCGCCTTATGCCGAGGTGATCGGCGATCCGATTGCCCAGTCGAAATCGCCGTTGATCCATGGCTTCTGGCTCGATGCGCTGGGAATGAAGGGCGACTATCGACGCGCGCATGTGAAACCCGACGATCTGGCCGCCTATATCACCGAGCGCCGGACCGATCCCGCCTGGCGCGGATGCAATGTTACCATCCCGCACAAGATCGCGGTGATGGATCTGGTCGATGATCCGGGCGACATTCGCGGCACGATCGGTGCGATGAACACGATCGTGCGGCAGCGCGACGGGTCGCTTATCGGGACCAACACCGACGCCGCGGGCTTTTATGCCCCGCTCGCCGAACTCGATCTCGAAGGCGCGCCGGTCGCGCTAATCGGCGCCGGCGGCGCGGCGCGAGCGGTGCTTTTTGCGCTCGCGCGCGCGAACGTGGGGCATGTCACCATCCTCAACCGTTCACCGCTGAAGGCGATGGGCCTGCTTGCCATCTTTGGCCTCAAGGGCGAGGTCGTCGCGCTCGATGCCCCGCTTCCGCCCGCCGCGTTGCTCGTGAATTCGAGCAGTCTTGGCATGACGGGGCAGCCGCCGCTTGACCTCGACCTGTCGCCGCTGCCCGACGATGCGATCGTATACGATCTTGTTTACGCGCCGCTGATGACAGGGCTGCTCCGCGCTGCCGAAGCGCGCGGGCTGGACATCGTCGATGGGCTCGACATGCTGATCGGTCAGGCGGCCTTGGCGTTCGAGCTGTTTTTCGGCGCGCCGCCGCCTGAGGGACGCGACGAGGAATTGCGCGCGATTCTGACGGCATGA
PROTEIN sequence
Length: 275
MTAADSAPYAEVIGDPIAQSKSPLIHGFWLDALGMKGDYRRAHVKPDDLAAYITERRTDPAWRGCNVTIPHKIAVMDLVDDPGDIRGTIGAMNTIVRQRDGSLIGTNTDAAGFYAPLAELDLEGAPVALIGAGGAARAVLFALARANVGHVTILNRSPLKAMGLLAIFGLKGEVVALDAPLPPAALLVNSSSLGMTGQPPLDLDLSPLPDDAIVYDLVYAPLMTGLLRAAEARGLDIVDGLDMLIGQAALAFELFFGAPPPEGRDEELRAILTA*