ggKbase home page

SCNpilot_expt_500_bf_scaffold_1148_2

Organism: SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8

near complete RP 50 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: comp(268..1161)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UU22_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 297.0
  • Bit_score: 571
  • Evalue 4.10e-160
  • rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:ENY81779.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 297.0
  • Bit_score: 571
  • Evalue 5.80e-160
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 85.4
  • Coverage: 295.0
  • Bit_score: 490
  • Evalue 3.80e-136
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 894
ATGTCGATCAATCGCATCTCCATCTATCATCTCGAAACCTTGCTGTGGATCGATCGGCTCGGCACATTCTCGGCCGCTGCCGAACGTCTCAACACGACGCAGCCCGCGGTGTCGGCGCGGATGCGCGAACTGGAGCAGCGATTGGGGTCGACGCTGTTTCGCCGCGACGGGCGCACCATGTCGCTGACCCCGGCGGGGCGCAAACTGGTCAATGATTGCACCCCGCTGCTGCGCGACATGCAACTCGCGCTGCTCGGCAGCGGCGGCTTCAATGAGGCGAGCGGCGTGGTGCGGATCGGCGCGGGCGAGATCGCGGCCGCAAGCTGCCTGCCGCCCTTCGTTGCGGCGCTGAAAGCTGAAATGCCCAATGTCGCGCTCGAGATCGAGATCGACCTGACCGCGAATCTGATCCAGCAACTGCTGACGGGCCGCACCGACCTGGCCTTCGCGGCGGGACCGATCGCGCACCCGGCACTTCGGACCAGCCCGATCGGCGAGGTTGCGCTGCTCTGGCTCGCCAACCCGGCGGTCGCCGCGCTGTTCGAGCGCGGAACGGGCGAACAGCAGGTGCCCGTCTGGTCGCTCGCCAGCCCCTCGCCGATCCACGGCCGGATGCGCGAGGCGATCGCGGCGTCGCGGATCGCGCAGAAATCGCTGAACCTGTGCAACAATGCCCGGATGATGATCGACATCGCACGCGCCGGCGGCGGCGTCGGCATCTTTCCCGAACCGATGGTGCGCGCCGAAGTCGCCGCGGGCGCGCTCGTCGAACTGGCGGGGCTGCCCGCGCTCGCGCCGGTCGAATTCCGCGTCGCGATGCGCGTGTCGGATACCGAACCGGTGCTGACGCGCATCTTCGATCAGGCCGCGAGCCTCAGCCTGACCGCGGGATAG
PROTEIN sequence
Length: 298
MSINRISIYHLETLLWIDRLGTFSAAAERLNTTQPAVSARMRELEQRLGSTLFRRDGRTMSLTPAGRKLVNDCTPLLRDMQLALLGSGGFNEASGVVRIGAGEIAAASCLPPFVAALKAEMPNVALEIEIDLTANLIQQLLTGRTDLAFAAGPIAHPALRTSPIGEVALLWLANPAVAALFERGTGEQQVPVWSLASPSPIHGRMREAIAASRIAQKSLNLCNNARMMIDIARAGGGVGIFPEPMVRAEVAAGALVELAGLPALAPVEFRVAMRVSDTEPVLTRIFDQAASLSLTAG*