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SCNpilot_expt_500_bf_scaffold_1148_9

Organism: SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8

near complete RP 50 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: 6235..7665

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 476.0
  • Bit_score: 943
  • Evalue 1.50e-271
isopropylmalate isomerase large subunit; K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] similarity KEGG
DB: KEGG
  • Identity: 93.9
  • Coverage: 476.0
  • Bit_score: 903
  • Evalue 3.90e-260
  • rbh
3-isopropylmalate dehydratase large subunit n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W2M7_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 476.0
  • Bit_score: 943
  • Evalue 1.10e-271
  • rbh

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1431
ATGACTCGGCCCCGCACGCTTTATGAGAAAATCTGGGACGCGCATGTCGTCGAACAGCGCCCCGACGGTACCTGCCTGATCTTCATCGACCGCCACCTCGTCCATGAAGTCACCAGTCCGCAAGCCTTCGCCGGGCTTCGCGCGAGCGGCCGCACGGTGCGCCGTCCCGACCTGACGCTGGCGGTTCCTGATCATAATCTGCCGACGACGGCGCGGCGCGATGCGGCGGGCAACCGGCTGCCGATCGCCGACCCCGAAAGCGCAGCACAGCTCGCCGCGCTCGAAAAGAATGCGCCCGAATATGGCATCCGCTACATCGACGCGGTGGCGCCCGAACAGGGCATCGTCCATGTCGTCGGCCCCGAACAGGGCTTCTCCCTGCCCGGCACGACGATCGTCTGCGGCGACAGCCACACCGCCTGCCACGGCGGCATCGGCGCGCTCGCCTTCGGCATCGGAACGAGCGAGGTCGAACATGTGCTGGCGACGCAGACGCTGTTGCTCCAGCCTGCAAAGACGATGGAAGTGCGCGTCGAGGGTGATGTCGGGCCCGGCGTCAGCGCGAAGGACATCATCCTTCACATCACCGGCGTGATCGGCGCTGCCGGCGGTACCGGCCATGTCATCGAATATACGGGCAGCGCAATTCGCGGCCTGAGCATCGAGGGCCGTCTGACGGTCAGTAACATGGCAATCGAGGGCGGCGCCCGCGCCGGGCTGATCGCACCCGACGATGTTACCTTCGCTTATCTGAAGGGCCGCCCCTACGCACCGAAGGGGGCCGACTGGGAGGACGCGGTCGCCTATTGGCGCAGCCTCGCGACCGATCCGGGCGCCACCTACGACAAGGTCGTCGTCATCGACGCCGCCGACATCGCACCAAGCGTCACCTGGGGAACCAGCCCCGAGGATGTCGTGCCGATCACCGGCATCGTTCCCGATCCCGCGAGCTTTGCCGACCCGTCGAAACAGGCCGCCGCCGCCAAGTCGCTCGCCTATATGGGCCTCGAACCCGGCACGCGGATGCAGGACGTCGCGATCGAGAACATCTTCATCGGCAGTTGCACCAACAGCCGGATCGAGGACATGCGCGCTGCCGCCGCGGTCATCAAGGGCCGGAAGAAGGCCGACAATGTCCGCTGGGCGATCGTCGTTCCGGGATCGGGCCTGGTCAAGGCGCAGGCCGAAGCCGAAGGGCTCGACCGCATCTTCATCGACGCAGGGCTCGAATGGCGCGAGCCGGGCTGTTCGGCGTGCCTCGCGATGAATCCCGACAAGGTACCCGCCGGCGAACGCTGCGCATCGACGAGTAACCGCAATTTCGTCGGCCGTCAGGGTCCGGGCAGCCGCACGCATCTTGTCAGCCCCGCGATGGCCGCAGCGGCGGCGGTGACCGGCAAGCTCACCGACGTGCGGGAGTTGATGGCATGA
PROTEIN sequence
Length: 477
MTRPRTLYEKIWDAHVVEQRPDGTCLIFIDRHLVHEVTSPQAFAGLRASGRTVRRPDLTLAVPDHNLPTTARRDAAGNRLPIADPESAAQLAALEKNAPEYGIRYIDAVAPEQGIVHVVGPEQGFSLPGTTIVCGDSHTACHGGIGALAFGIGTSEVEHVLATQTLLLQPAKTMEVRVEGDVGPGVSAKDIILHITGVIGAAGGTGHVIEYTGSAIRGLSIEGRLTVSNMAIEGGARAGLIAPDDVTFAYLKGRPYAPKGADWEDAVAYWRSLATDPGATYDKVVVIDAADIAPSVTWGTSPEDVVPITGIVPDPASFADPSKQAAAAKSLAYMGLEPGTRMQDVAIENIFIGSCTNSRIEDMRAAAAVIKGRKKADNVRWAIVVPGSGLVKAQAEAEGLDRIFIDAGLEWREPGCSACLAMNPDKVPAGERCASTSNRNFVGRQGPGSRTHLVSPAMAAAAAVTGKLTDVRELMA*