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SCNpilot_expt_500_bf_scaffold_1148_10

Organism: SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8

near complete RP 50 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: 7662..8258

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 198.0
  • Bit_score: 398
  • Evalue 7.60e-108
leuD; isopropylmalate isomerase small subunit; K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] similarity KEGG
DB: KEGG
  • Identity: 86.7
  • Coverage: 196.0
  • Bit_score: 350
  • Evalue 3.10e-94
  • rbh
3-isopropylmalate dehydratase small subunit n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WDH8_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 198.0
  • Bit_score: 398
  • Evalue 5.40e-108
  • rbh

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 597
ATGACCCCACTGGAAAAGGTCGAAGGCCGCGCGATTCCGCTCGGGCTCAAGAATGTCGATACCGACGTCATCATTCCCGCGCACTGGCTCAAGACCACGAGCCGCGAAGGCATGGGCCGCGGCGCGTTCGAAAGCCTGCGCGCCGATCCCGACAATCTGTTCGACCGGCCCGAGAACAAGGGCGCACCCATCCTGATCGCGGGCGACAATTTCGGCTGCGGGTCGAGCCGCGAACATGCCGCTTGGGCGCTCGGCGACCTTGGCATCCGTGTCGTCATCGCGCCCAGCTATTCGGACATTTTCTCGGGCAATGCCGTGAAGAACGGCATCTTGCCCGTCGTGCTGCCGCAGGCGGCGGTCGACCGGCTGATCGAGGTCGCGGCAACCGATCCGATTCACGTCGACCTCGACACGCAGACGGTGACGACGCCCTTCCAGGATCGCTTCACCTTCGAAATCGACCCGTTCCGCAAGATGTGCCTGCTCGGCGGTCTCGACGAGATCTCGCTCACCGAAAAAAGCGGCCGGGCGATCGACGCTTATGAGGCAAAACTGGCGGCCGAGCGTCCCTGGTTACAGCCCGCGCTTACCGAATAA
PROTEIN sequence
Length: 199
MTPLEKVEGRAIPLGLKNVDTDVIIPAHWLKTTSREGMGRGAFESLRADPDNLFDRPENKGAPILIAGDNFGCGSSREHAAWALGDLGIRVVIAPSYSDIFSGNAVKNGILPVVLPQAAVDRLIEVAATDPIHVDLDTQTVTTPFQDRFTFEIDPFRKMCLLGGLDEISLTEKSGRAIDAYEAKLAAERPWLQPALTE*