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SCNpilot_expt_500_bf_scaffold_1148_14

Organism: SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8

near complete RP 50 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: comp(9990..11792)

Top 3 Functional Annotations

Value Algorithm Source
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 600.0
  • Bit_score: 1224
  • Evalue 0.0
sdhA; succinate dehydrogenase flavoprotein subunit; K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] similarity KEGG
DB: KEGG
  • Identity: 93.9
  • Coverage: 605.0
  • Bit_score: 1160
  • Evalue 0.0
  • rbh
Succinate dehydrogenase flavoprotein subunit n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W2N4_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 600.0
  • Bit_score: 1224
  • Evalue 0.0
  • rbh

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1803
ATGACCGAAGCCTACAAGATCATCGACCACACCTATGACACCGTCGTCGTCGGCGCCGGCGGTTCGGGCCTGCGCGCAACGATGGGCAGCGCCGAGGCCGGCCTGCGCACCGCCTGCATCACCAAGGTGTTCCCGACGCGCAGCCACACCGTCGCGGCGCAGGGCGGCATCGCCGCCAGCCTCGGCAACAACAGCCCCGACCATTGGCAGTGGCATATGTACGACACCGTCAAGGGCTCCGACTGGCTGGGCGATCAGGACGCGATCGAATATATGGTGCGCGAGGCGCCCGCCGCGGTCTACGAACTCGAACATGCCGGCGTGCCTTTTTCGCGCAACGCCAATGGCACCATCTATCAGCGCCCGTTCGGCGGCCATATGCAGAATATGGGCGAAGGCCCGCCGGTGCAGCGGACCTGCGCCGCCGCCGACCGCACCGGCCACGCGATGCTCCACGCGCTCTATCAGCAGAGCCTGAAGTATGACGCGGACTTCTTCATCGAATATTTCGCGCTCGACCTGATCATGGAACACGGCGTGTGCCGCGGCGTGATCGCGCTGTGCATGGAGGATGGCAGCATCCACCGCTTCCGCAGCCAAGCGGTCGTGCTCGCGACCGGCGGCTATGGCCGCTGCTATTTCACCGCGACCTCGGCACATACCTGCACCGGCGACGGCGGCGGGATGGTGCTGCGCGCGGGCCTGCCGCTCCAAGACATGGAGTTCGTCCAGTTTCACCCGACCGGCATCTACGGTGCGGGTGTCCTCATCACCGAGGGCGCGCGCGGCGAGGGCGGGTATCTGACCAATTCCGAAGGCGAGCGCTTCATGGAACGCTATGCCCCGTCGGCGAAGGATCTGGCGTCGCGCGACGTCGTGTCGCGTTCGATGGCGCTCGAAATCCGCGAAGGCCGCGGCGTCGGTCCGCACAAGGACCATATCTTCCTGCACCTCGATCATATCGATCCCGCGGTGCTGGCGGAGCGTCTGCCGGGCATCACCGAAAGCGGCAAGATTTTCGCGGGCGTCGACCTGACGCGCCAGCCGCTGCCGGTCGTGCCGACGGTCCATTACAATATGGGCGGCATCCCCTGTAACTATCACGGCGAAGTCGTGACGCTGAAGGACGGCAACCCCGATGCGGTCGTCCCCGGCCTGTTCGCGGTTGGCGAGGCGGCGTGCGTGTCGGTCCACGGCGCGAACCGCCTCGGCTCGAACAGCCTGATCGACCTTGTCGTCTTCGGACGCGCGACGGGTCATCGGCTCAAGGAAATCGTAGCGCCCGGCGCCGCGCAGCCCGCGCTGCGGAAGGACAGCGCCGACCTCGCGCTCGGCCGCCTCGACCATTTCCGCAATGCGAGCGGCGGTTCGCCGACCGCCGAAATCCGCACCGAGATGCAGCGCGCGATGTCGCAGCATGCGGCGGTGTTCCGCACCGACGAGCTGATGGCCGAGGGCAAGGACAAGCTTGCCAAAACCTATGAGCGCATGAACGACGTCCATGTCGCCGACCGCAGCCTGATCTGGAATACCGATCTCGTCGAAACGCTCGAGCTCGACAATCTGATCGCGCAGGCGACGGTGACGATGCATTCGGCGTTCAACCGCAAGGAAAGCCGCGGCGCGCACGCGCACGAGGATTTCCCGAACCGCGACGATGCGAACTGGATGAAGCACACGATCAGCTGGTTCGACGGCTGGGGCGGCAAGGACGGCAAGGTGACGCTCGATTACCGTCCGGTCCACGAATATACGCTGACCGACGATGCCGAATATATCAAGCCGAAGGCGCGCGTTTACTGA
PROTEIN sequence
Length: 601
MTEAYKIIDHTYDTVVVGAGGSGLRATMGSAEAGLRTACITKVFPTRSHTVAAQGGIAASLGNNSPDHWQWHMYDTVKGSDWLGDQDAIEYMVREAPAAVYELEHAGVPFSRNANGTIYQRPFGGHMQNMGEGPPVQRTCAAADRTGHAMLHALYQQSLKYDADFFIEYFALDLIMEHGVCRGVIALCMEDGSIHRFRSQAVVLATGGYGRCYFTATSAHTCTGDGGGMVLRAGLPLQDMEFVQFHPTGIYGAGVLITEGARGEGGYLTNSEGERFMERYAPSAKDLASRDVVSRSMALEIREGRGVGPHKDHIFLHLDHIDPAVLAERLPGITESGKIFAGVDLTRQPLPVVPTVHYNMGGIPCNYHGEVVTLKDGNPDAVVPGLFAVGEAACVSVHGANRLGSNSLIDLVVFGRATGHRLKEIVAPGAAQPALRKDSADLALGRLDHFRNASGGSPTAEIRTEMQRAMSQHAAVFRTDELMAEGKDKLAKTYERMNDVHVADRSLIWNTDLVETLELDNLIAQATVTMHSAFNRKESRGAHAHEDFPNRDDANWMKHTISWFDGWGGKDGKVTLDYRPVHEYTLTDDAEYIKPKARVY*