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SCNpilot_expt_500_bf_scaffold_1148_16

Organism: SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8

near complete RP 50 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: comp(12191..12634)

Top 3 Functional Annotations

Value Algorithm Source
Succinate dehydrogenase subunit C n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GNN8_SPHAL similarity UNIREF
DB: UNIREF100
  • Identity: 81.0
  • Coverage: 147.0
  • Bit_score: 253
  • Evalue 9.40e-65
succinate dehydrogenase, cytochrome b subunit; K00241 succinate dehydrogenase cytochrome b556 subunit similarity KEGG
DB: KEGG
  • Identity: 81.0
  • Coverage: 147.0
  • Bit_score: 253
  • Evalue 3.00e-65
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 84.9
  • Coverage: 139.0
  • Bit_score: 255
  • Evalue 4.50e-65

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Taxonomy

RHI_Sphingopyxis_65_19 → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 444
ATGGCTGGCAAAGAACCGAGCGGACGTCCGCTCTCGCCGCACCTCCAGGTGTATAAATGGGGGCCGCACATGGCGGTCTCGATCTTCCACCGCGTCAGCGGCGACGGGCTCGCCATCGTCGGTGCGCTGATGTTCCTCGGCTGGCTCGGCGCGATCGCGGCGGGCCCGGAGGCCTATGCGGCCTTCGTCGCCTGCGTCTGGCACGACCCCGCGGGCGGCAGCGTGCATCAGGTCACCAATATTCTGGGCAAGATCGTGCTCGTCGGCCTGACCTGGGCCTTTTTCCAGCATCTGTTTTCGGGCCTGCGCCACTTCGTGCTCGATACCGGCGCGGGTTATGAACTCAAGGCCAACAAGCTCTGGTCGACCGTCGTGATCGTGGGCGCGATCCTCGCGACCGCCGCGACCTGGCTCTATATCGCCAAGGAGGCGCTCAATGGGTAA
PROTEIN sequence
Length: 148
MAGKEPSGRPLSPHLQVYKWGPHMAVSIFHRVSGDGLAIVGALMFLGWLGAIAAGPEAYAAFVACVWHDPAGGSVHQVTNILGKIVLVGLTWAFFQHLFSGLRHFVLDTGAGYELKANKLWSTVVIVGAILATAATWLYIAKEALNG*