ggKbase home page

SCNpilot_expt_500_bf_scaffold_1148_23

Organism: SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8

near complete RP 50 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: 16234..16941

Top 3 Functional Annotations

Value Algorithm Source
Short-chain dehydrogenase/reductase SDR n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UU38_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 97.9
  • Coverage: 235.0
  • Bit_score: 465
  • Evalue 4.30e-128
  • rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ENY81799.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.9
  • Coverage: 235.0
  • Bit_score: 465
  • Evalue 6.00e-128
short-chain dehydrogenase/reductase SDR similarity KEGG
DB: KEGG
  • Identity: 79.6
  • Coverage: 235.0
  • Bit_score: 384
  • Evalue 1.80e-104
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 708
ATGAAAACCCACATTCTGATTACCGGGGCCAGCCGCGGCATCGGTGCGGCCATCGCCGACGCGCTGGCGACCGACGCGACGAAGGTCGTCGCGCTATCGAGCGCCGACGGCGACCTTGGCGACCCTGCGGTTCCGGACCAAATATGGGCCGAAAGCCTCGACCGGCTCGACGGCCGGATCGACGTGCTCGTCAATAATGCCGGCGTTTTCGAAGCGAATCCGGTCGGTGCCAGCGATGCCGACTGGCTCGAAAGCTGGAACCGGACCCTTCAGATCAACCTGACCGCCGCCGCGCTACTGTGCCGCCGTGCGGTGCAGCACTGGCAGGCGCGCCGGGCCGCAGGCGACACGGTCGATGGCCGGATCGTCAGTATCGCCAGCCGCGCCGCCTATCGCGGCGACAGTCCCGCGCATTGGCATTATGCGGCATCGAAGGCGGGCATGGTCGCGATGACCAAGACGATTGCGCGCGGCTATGCCCATGACGGCATCCTCGCCTTTGCCATTTGCCCCGGCTTCACGATGACCGGCATGGCCGAGGACTATCTCGCCAGCCGGGGCGGCGACACATTGCTCGCCGACATCCCGCTGGGCCGCGTGGCGAGCCCGGAGGAAATCGCCGAAATGGCGCGCTGGTGCGCGCTCGAAGCGCCGCCGTCGATGACCGGCGCGATCCTCGATGCCAATGGAGCCAGCTATGTCCGCTAA
PROTEIN sequence
Length: 236
MKTHILITGASRGIGAAIADALATDATKVVALSSADGDLGDPAVPDQIWAESLDRLDGRIDVLVNNAGVFEANPVGASDADWLESWNRTLQINLTAAALLCRRAVQHWQARRAAGDTVDGRIVSIASRAAYRGDSPAHWHYAASKAGMVAMTKTIARGYAHDGILAFAICPGFTMTGMAEDYLASRGGDTLLADIPLGRVASPEEIAEMARWCALEAPPSMTGAILDANGASYVR*