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SCNpilot_expt_500_bf_scaffold_1977_1

Organism: SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8

near complete RP 50 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: comp(2..1621)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V9G7_SPHWW similarity UNIREF
DB: UNIREF100
  • Identity: 59.4
  • Coverage: 554.0
  • Bit_score: 632
  • Evalue 4.60e-178
Uncharacterized protein {ECO:0000313|EMBL:AHE54286.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.2
  • Coverage: 565.0
  • Bit_score: 665
  • Evalue 5.30e-188
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 59.4
  • Coverage: 554.0
  • Bit_score: 632
  • Evalue 1.50e-178

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Taxonomy

Sphingomonas sanxanigenens → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1620
ATGAGGACGTCGCACACATTTTCCAGCCTCCTGCTTCTGAGTTCGGCGCTCATCGCGCCGAGCGCCATCGCGCAAACGAGCGAGCAGACCGAACCCGCGCCGGCAGCGACTACACCTCCCCCCGCGGAAGATGAACAAGTCGAGGTTTCGGTTCCCGGTGCTTCTTTCGACGGCGAAATCGTCGTCACCGGCCGCTATATTCCCAATATCGTTCGCGCGACACCGCAGGTCGTGTCGGTGCTCTCGAACGAGGAAATCGAACGCGCGGGCGATGGAGACATTGCGGGCGCGCTGCAGCGCGTGACCGGCCTGTCCGTCGTGGGCAACGGCTATGTCTATGTGCGCGGTCTCGGTGACCGTTACTCACTCGCCCTGCTGAACGGATCGCCGCTTCCGTCTCCCGAACCGTTGAAGCGAGTCGTCCCTCTCGATCTCTTTCCGACCAGCATTGTCGGCAGCGCACTCGTTCAGAAGACCTATTCGGCAAATTATCCGGGCGAGTTCGGCGGCGGCGTGATCAACCTCACGACGAAAGCCTTGCCCGACGAACCTTTTCTCAAACTCGGTTTCGGCATGAGCGGCGACAGCGAGACGACCGGCCAGCTCGGCTATACCTATTATGGCGGCGACTTCGACTTCCTTGGTTATGACGATGGCACGCGTTCAATCCGAGGCCCTCTCAAGGCTGCTCTGAACAGCGGCAAGCTCATCACCGAAGGTGCCGACTTCTCGGCGCGCGACATTCATGACATCGCGGCGAGCCTGTCGAATGCGTCGACCTCGCTTCTTCAGCGCAACAACAATATTCCGGTGAATTTCTCCGCAGATCTCAGTGCCGGCTCGCGCTGGGATATCGGCGGCAATCGCCTAGGCTTTATCGCCGCCGCAGGGTTCAGCAACAATTGGTCGACGCGTGACGCGGTGCAGCAACTCTCGGGCGGCTTCACCGAAGGGCGCCTCGACCCTAATGTCAATTTCCGTGCCGTGCGCACCGACAACCGCATCGTCGTCAACGGGCTGCTCGGGCTCGGCTTTGAATTCGGCGAGCATAAGCTGCGCTGGACGAACCTCTATATCCACGACACCCTCAAGCAGTCGCGCTTGTCGACTGGTTTCGATACCGAAGGCCTCGGTGACAATACGCGGGTCATGAAACAGGACACCAATTGGGTCGAGCGGCAACTTATCGACACCCAGTTCGTTGGCGAATTCAAGTTCGATGACCTCAGCGTCGACATCCGCGGAACCTATGCGAATACCAAGCGCGACGCGCCCTATGAGCGCAGTTTCAGCTATGTGTTCGACGATTCCATCGGCGACTATGTCAACAACCTGCGTGCTGCCGGACAGAATGCCCGCATCGTGTTCAGCGAGCTCAACGAGGACGTATATGCGGGTGCCATCGACCTCGGTTACAAGCTTCCGACATCGATGAATATCACGGTCCACGGAGGATATGCCTACACCAGCACGAAGCGCGATGCCTCGCGGCGCGAGTTTCGCTTCGTGCCCGCTGACGAGCTGCCGATCCCGGTGACTCAGCAACGCCCCGACTATCTCCTGTCGGACTTCAACATCTACACCTATGATATCCAGCTCACCGAAACCTCGGGTCAAGCG
PROTEIN sequence
Length: 540
MRTSHTFSSLLLLSSALIAPSAIAQTSEQTEPAPAATTPPPAEDEQVEVSVPGASFDGEIVVTGRYIPNIVRATPQVVSVLSNEEIERAGDGDIAGALQRVTGLSVVGNGYVYVRGLGDRYSLALLNGSPLPSPEPLKRVVPLDLFPTSIVGSALVQKTYSANYPGEFGGGVINLTTKALPDEPFLKLGFGMSGDSETTGQLGYTYYGGDFDFLGYDDGTRSIRGPLKAALNSGKLITEGADFSARDIHDIAASLSNASTSLLQRNNNIPVNFSADLSAGSRWDIGGNRLGFIAAAGFSNNWSTRDAVQQLSGGFTEGRLDPNVNFRAVRTDNRIVVNGLLGLGFEFGEHKLRWTNLYIHDTLKQSRLSTGFDTEGLGDNTRVMKQDTNWVERQLIDTQFVGEFKFDDLSVDIRGTYANTKRDAPYERSFSYVFDDSIGDYVNNLRAAGQNARIVFSELNEDVYAGAIDLGYKLPTSMNITVHGGYAYTSTKRDASRREFRFVPADELPIPVTQQRPDYLLSDFNIYTYDIQLTETSGQA