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SCNpilot_expt_500_bf_scaffold_1977_18

Organism: SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8

near complete RP 50 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: 17058..17204

Top 3 Functional Annotations

Value Algorithm Source
Major facilitator superfamily MFS_1 n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GPE1_SPHAL similarity UNIREF
DB: UNIREF100
  • Identity: 91.7
  • Coverage: 48.0
  • Bit_score: 91
  • Evalue 3.50e-16
Major facilitator superfamily transporter {ECO:0000313|EMBL:AJA11245.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.8
  • Coverage: 48.0
  • Bit_score: 92
  • Evalue 1.30e-16
major facilitator superfamily transporter similarity KEGG
DB: KEGG
  • Identity: 91.7
  • Coverage: 48.0
  • Bit_score: 91
  • Evalue 1.10e-16

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Taxonomy

Sphingopyxis fribergensis → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 147
GTGACGGCAAAGCGCACCATTCCGTTCATTGTGGCGACCATCTTCATCGATGCGATCGGGTTCGGCATCATCATGCCGGTGCTGCCGCAGCTCGTGATGGAGGTGGGGCGCATCGATCTGCCGCATGCGATCGAGGTCGGGGCGTGA
PROTEIN sequence
Length: 49
VTAKRTIPFIVATIFIDAIGFGIIMPVLPQLVMEVGRIDLPHAIEVGA*