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SCNpilot_expt_500_bf_scaffold_2543_19

Organism: SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8

near complete RP 50 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: comp(16860..19268)

Top 3 Functional Annotations

Value Algorithm Source
CzcA family heavy metal efflux pump n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9D9G5_SPHYA similarity UNIREF
DB: UNIREF100
  • Identity: 88.3
  • Coverage: 801.0
  • Bit_score: 1351
  • Evalue 0.0
  • rbh
CzcA family heavy metal efflux pump {ECO:0000313|EMBL:EKU74180.1}; TaxID=883163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae ATCC 51230.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.3
  • Coverage: 801.0
  • Bit_score: 1351
  • Evalue 0.0
CzcA family heavy metal efflux protein; K15726 cobalt-zinc-cadmium resistance protein CzcA similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 795.0
  • Bit_score: 1027
  • Evalue 0.0

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Taxonomy

Sphingobium yanoikuyae → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2409
GTCGTCGCGACGCGCGCGGGCGTTCCCGTTCGCGTGAAGGATGTCGGCGAAGTGGTGATCGGGGGCGCGGTGCGCACCGGGTCGGGCAGCCGCATGGGCTCGGAGGCGGTCATTTCGACCGTGCTGATGCTCACTGGCGACAATAGCCGTATCGTCGCCACCAGCGCGGCCGAGAAACTGACGGCGATCAACAAGAACCTGCCGCCGGACGTGTTCGCCGAGCCCGTCTATAACCGCTCGAAGCTGGTCAATGCGACGATCGCCACCGTCGAGAAGAATCTCGTCGAGGGCGCCTTGCTCGTCATCGCGGTGCTCTTCCTGCTGCTCGGCAACATCCGCGCCGCGCTGATCACCGCCGCGGTCATTCCGATCACGATGCTGATGACGGCATCGGGCATGAATGCGCTCGGCGTCTCGGGCAATCTGATGAGCCTCGGCGCGCTCGACTTCGGCCTGATCGTCGATGGCGCTGTCATCATCGTCGAAAATGCCCTGCGCCGGCTTGCCGAAAGGCAGGAGCATGAAGGGCGTTTGCTCAGCCGCTCCGAACGAATGGAGGAAACCACGCTTGCGGCGCAGGAGATGATCCGGCCGACCGTCTATGGTCAGCTCATCATCTTCCTCGTCTTCGTACCGCTGCTCACCTTCCAGGGCGTCGAGGGCAAGACCTTCGCGCCGATGGCGATCACCCTGATGCTCGCACTCGCAGCCGCCTTCGTCCTCTCGCTGACCTTCATCCCCGCGATGATCGCCATCGTGATCAAGGGCAAGGTCAGCGAGACCGAGGTCAAGCCGATCCGCTGGTTCAAGGAGAAATATGAGCCGCTCCTGAAAAAGGCCGTCGCGCGCCCGCAGCCCTTCGTGGCGTCAGGCGTCGGCGTCTTCCTCGCCGCGGTGCTGGCATTCGGCTTCCTCGGTGAGGAGTTCATGCCGCAGCTCGACGAGAAGGACATCACGGTCACCAACTTCCGCGTGCCCTCGGCGTCGATCGACCAGTCGACGCAGATGCAGCTTCGCATCGAGGATGCGCTGAAGTCCTTGCCCGAGGTTGCGCTCGTCTTCTCGAAGAACGGGAATGCCGATCTCGGGACCGACCCGATGCCGCCCAATGCGTCGGACACTTATGTGATTCCGAAGCCGGAAGACGAATGGCCAGCCGAGGTGAAGAGCAAGGAGGACATCCTTCGCCGCATCGAGGAGCGGATGAAACCGCTCATCGGCAATCGCACCGAGATTCAGCAGCCGATCCAGATGCGCTTCAACGAACTGATCGCCGGCGTTCGCGCCGACGTGGCCGTGAAGCTCTACGGAGACGATCTCGACGCCATGAGCGTGCAGGCGAACCGCATCGCGGGGGTTTTGCGGCGTATTCCGGGTGCAGGCGACGTCAGCGCCGAGCAGACGTCGGGGGCTCCGACCTTCGACGTCAAGATCGATCACCAGGCGGCAGCCCGCTACGGGCTGTCGGTCGAGGAGGTCGCGAACACGGTTGCGGCTGCGCTCGGCGGGCGGGAGGCCGGACTTCTCTTCGAGGGCGATCGCCGCTTCTCGGTGGTCGTCCGCCTGCCCGATGCCCAGCGCGACGACCTCGAGACATTGGGTTCGATCCCGGTGATGCTCGCGGCGGGCGAAGGGCAGATCGCGAGCTCGATCCCGCTCCGCGAAGTAGCAAAGTTCAGCTACACGCAGGGCCTCAACCAGATCAGCCGCGAAAATGGCAAGCGGATGGTCGTGGTGCAGGTCAATGTGCGCGGCCGCGATCTCGGCGGTTTCGTCACCGAGGCGCAGGACAAGATCGGGGCGCTCGACCTGCCAGCGGGCATGTATACCGATTGGGGCGGCACGTTCGAAAGTCTCCAGTCGGCCCGGCTTCGCCTGCTGATCGTGGTGCCGATCTGCTTCCTTGCCATTTACGCCCTGCTTTACATGGCGCTCGGCGGCTTCCGGCCGGCGGCGATCGTGTTCAGCGCGGTGCCGATGGCCCTCGCGGGCGGCGTCTTCGCGCTGCTGCTGCGGGGAATCCCCTTCTCGATCACGGCCGCGGTCGGGTTCATCGCGCTATCGGGCGTCGCCGTCCTCAACGGCCTCGTCATGATGAGCGCGATCCGCAGCCGCCGCGATGCGGGAATCGGGGATGATGAAGCGATCATCGGCGGCGCGATGGAGCGCGTGCGTCCGGTACTGATGACGGCGCTCGTGGCGAGCCTCGGCTTTGTGCCGATGGCGCTTGCAACGGGAACCGGCGCCGAGGTCCAGCGGCCGCTGGCCACGGTCGTCATCGGCGGCCTGATCACCTGCACCGCGCTCACCCTGCTCGTCCTGCCGGCGATCTCGGCCTGGCTCTATCGCCGGTCCGCAGCCGCCAACCAGCGGCCGGGCGATACGGTGGAACCGGCCACGGCAAGCTGA
PROTEIN sequence
Length: 803
VVATRAGVPVRVKDVGEVVIGGAVRTGSGSRMGSEAVISTVLMLTGDNSRIVATSAAEKLTAINKNLPPDVFAEPVYNRSKLVNATIATVEKNLVEGALLVIAVLFLLLGNIRAALITAAVIPITMLMTASGMNALGVSGNLMSLGALDFGLIVDGAVIIVENALRRLAERQEHEGRLLSRSERMEETTLAAQEMIRPTVYGQLIIFLVFVPLLTFQGVEGKTFAPMAITLMLALAAAFVLSLTFIPAMIAIVIKGKVSETEVKPIRWFKEKYEPLLKKAVARPQPFVASGVGVFLAAVLAFGFLGEEFMPQLDEKDITVTNFRVPSASIDQSTQMQLRIEDALKSLPEVALVFSKNGNADLGTDPMPPNASDTYVIPKPEDEWPAEVKSKEDILRRIEERMKPLIGNRTEIQQPIQMRFNELIAGVRADVAVKLYGDDLDAMSVQANRIAGVLRRIPGAGDVSAEQTSGAPTFDVKIDHQAAARYGLSVEEVANTVAAALGGREAGLLFEGDRRFSVVVRLPDAQRDDLETLGSIPVMLAAGEGQIASSIPLREVAKFSYTQGLNQISRENGKRMVVVQVNVRGRDLGGFVTEAQDKIGALDLPAGMYTDWGGTFESLQSARLRLLIVVPICFLAIYALLYMALGGFRPAAIVFSAVPMALAGGVFALLLRGIPFSITAAVGFIALSGVAVLNGLVMMSAIRSRRDAGIGDDEAIIGGAMERVRPVLMTALVASLGFVPMALATGTGAEVQRPLATVVIGGLITCTALTLLVLPAISAWLYRRSAAANQRPGDTVEPATAS*