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SCNpilot_expt_500_bf_scaffold_2182_8

Organism: SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8

near complete RP 50 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: 11422..12888

Top 3 Functional Annotations

Value Algorithm Source
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 488.0
  • Bit_score: 987
  • Evalue 9.40e-285
cysteinyl-tRNA synthetase; K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] similarity KEGG
DB: KEGG
  • Identity: 76.8
  • Coverage: 531.0
  • Bit_score: 805
  • Evalue 8.70e-231
  • rbh
Cysteine--tRNA ligase n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UW01_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 98.8
  • Coverage: 488.0
  • Bit_score: 987
  • Evalue 6.70e-285
  • rbh

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1467
ATGGGCGCGGTCATGACCGATACCCCCGCCCCCGCTTCCGGCGCACCGCTGCGGCTGTTCAACAGCCTGACGCGCCAGTTGGAGCCCTTCGCGCCCGTCCACCCCGGCGAAGCGCGCGTTTATTCCTGCGGGCCGACGGTCTATAATTATCCGCATATCGGCAACATGCGCGCTTATGTCTTCGCCGACACGCTGGGCCGGACGCTGACCTACAAGGGTTACAGGCTGACCCACGTCATCAATATCACCGACGTCGGTCACCTGACCGACGACGCCGATGCGGGCGAGGACAAGCTGGAAAAGGCGGCGGCCGAACGCGCCCAGTCGATCTGGGACATCGCGCGCCACTATACCGAGGCCTATTGGGCCGACATCAAGGCGCTGAACATCCGCCAGCCGGCGCATTGGTCGATCGCCACCGATTACGTGCCGCAGATGATCGACTTCGCGAAGGCGATCGCGGACAAGCATTGCTATGAACTCGACAGCGGTCTCTATTTCGACACCACGAGCGTGGCCGACTACGGCCGCCTCGCGCGCCACGGCACTGACGAAGGCGAAAGCCGGATCGACCCCGTCGACGGCAAGCGGCATCCGGCCGATTTTGCCATCTGGCGCAAGACGCCGCCGGGCGAAACGCGCCAGATGGAATGGGATTCGCCCTGGGGCCGCGGCGCGCCGGGCTGGCACCTCGAATGCTCGGTAATGTCGGAGGCGCTGCTCGGCTTTCCGTTCGACATCCACACCGGCGGCATCGACCATCGCGAAATCCACCACCCGAACGAAATCGCCCAGAACCAGGCGCATAGCTGCTCGGCCGACAGCGGCGCGCGGATGTGGATGCACAATAATTTCCTCGTCGAACGCAGCGGCAAGATGTCGAAGAGTTCGGGCGAATTCCTGCGTCTGCAATTGCTGATCGACAAGGGCTATCACCCCCTCGCCTACCGCCTGATGTGCCTGCAGGCGCATTATCGCAGCGAGCTGGAATTTTCGTGGGAGGGTTTGGGCGCGGCGCTCACACGGCTCAAACGGCTGGTGATGGGCGTCGCTCCCGTGCGCGACATTCCCGCCGCAGCGGTCGAAGATCGCCGACTGACCGACCTGCTCGACAAGTTCGACGCCGCCATCTCGGACGACCTCAACACCTCGGTCGCGTTGACGCTGCTCGAAGACGTCATCGCGATGAAAAAGATCGACGCCGGACAAAAGCGCGCCGCGATCGGGACCATCGACGCGGTTCTGGGCATCGGTCTTCTGGATCTGCTGCGCGAAGATCTGCGCATCCGCCCCAAAGCGGCGACGATCACGGACGAGGAAATAGAAGCCGCCCTCGCCCGCCGCAAGGAAGCGCGCGCGGCAAAGGATTTCGCCACGTCCGACAAGCTGCGCGACGAATTGATCGCCGCGGGCGTCGAGGTCATGGACGGCGATCCGCTCGGTTGGGACTGGCGGCTGGAAAATTAA
PROTEIN sequence
Length: 489
MGAVMTDTPAPASGAPLRLFNSLTRQLEPFAPVHPGEARVYSCGPTVYNYPHIGNMRAYVFADTLGRTLTYKGYRLTHVINITDVGHLTDDADAGEDKLEKAAAERAQSIWDIARHYTEAYWADIKALNIRQPAHWSIATDYVPQMIDFAKAIADKHCYELDSGLYFDTTSVADYGRLARHGTDEGESRIDPVDGKRHPADFAIWRKTPPGETRQMEWDSPWGRGAPGWHLECSVMSEALLGFPFDIHTGGIDHREIHHPNEIAQNQAHSCSADSGARMWMHNNFLVERSGKMSKSSGEFLRLQLLIDKGYHPLAYRLMCLQAHYRSELEFSWEGLGAALTRLKRLVMGVAPVRDIPAAAVEDRRLTDLLDKFDAAISDDLNTSVALTLLEDVIAMKKIDAGQKRAAIGTIDAVLGIGLLDLLREDLRIRPKAATITDEEIEAALARRKEARAAKDFATSDKLRDELIAAGVEVMDGDPLGWDWRLEN*