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SCNpilot_expt_500_bf_scaffold_5993_5

Organism: SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8

near complete RP 50 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: comp(4598..5002)

Top 3 Functional Annotations

Value Algorithm Source
Cell shape-determining protein MreC n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UT01_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 97.8
  • Coverage: 134.0
  • Bit_score: 260
  • Evalue 1.20e-66
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.8
  • Coverage: 134.0
  • Bit_score: 260
  • Evalue 1.70e-66
rod shape-determining protein MreC; K03570 rod shape-determining protein MreC similarity KEGG
DB: KEGG
  • Identity: 88.1
  • Coverage: 135.0
  • Bit_score: 233
  • Evalue 3.80e-59

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Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 405
GCCGACGGGCTGATTGGCCGGGTGCTGACCGCCGGGCCTTCGGTGTCGCAGGTTCTGCTCCTTACCGATGTCGAAAATGTCGTGCCGGTGCGCCGGGCGCGCGACGGCCTGCCGGCGCTCGCCACGGGCCGCGGCAACGGCGATCTCGACGTTCGCACGCTCAACATTGCGACCAATCCCTTCAAACCGGGCGACATCCTCGTCACGTCGGGAACCGGGGGCCTCTATCCGCCGAACATCCCGGTCGCCATTGTCGTGCGGCGCCAGGACGATGGCGCGCTCGCGCGTCCGCTCGCCGACCCGGCAAAGGTCGATGCGGTGGCGGTGCTGCGCCCCTATACGCCCGATAATATCGAGGCGCAGGCCGTGCCCGCCAAATCCTCCCCGGGGGCCGGCGCGCCATGA
PROTEIN sequence
Length: 135
ADGLIGRVLTAGPSVSQVLLLTDVENVVPVRRARDGLPALATGRGNGDLDVRTLNIATNPFKPGDILVTSGTGGLYPPNIPVAIVVRRQDDGALARPLADPAKVDAVAVLRPYTPDNIEAQAVPAKSSPGAGAP*