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SCNpilot_expt_500_bf_scaffold_5406_6

Organism: SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8

near complete RP 50 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: comp(5103..5402)

Top 3 Functional Annotations

Value Algorithm Source
Inner membrane component of tripartite multidrug resistance system n=1 Tax=alpha proteobacterium JLT2015 RepID=M2S7Q6_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 82.8
  • Coverage: 99.0
  • Bit_score: 172
  • Evalue 2.40e-40
Putative multidrug resistance transmembrane protein {ECO:0000313|EMBL:AJA09587.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.0
  • Coverage: 99.0
  • Bit_score: 195
  • Evalue 2.90e-47
multidrug resistance transmembrane protein; K03446 MFS transporter, DHA2 family, multidrug resistance protein B similarity KEGG
DB: KEGG
  • Identity: 74.7
  • Coverage: 99.0
  • Bit_score: 153
  • Evalue 4.80e-35

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Taxonomy

Sphingopyxis fribergensis → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 300
TTCGCTTTGGCCGGACTGGCTTCGTTTCAGGACCAGCGGATCTGGCACCATAGCCGGCGCATGGAAGAGACGCTGAATGCCAACAGTGCTTCACTCCAGATTTATCTTGATGAACTCGCGAAAAGCTTCGGCGGGATGGAGGGTGCCATGTCGATGCTAGGCCGGACCATCCAGCGGGACGCGTTCGTAATGACCTACAATGATGTATTCTTGGTGATGGGCGTCCTGACCTTGATGACCGTTCCTTTGGTCATCTTTTTGAAGCCGCTTCCCAAGAATGTTTCCCTTTCGATGCACTGA
PROTEIN sequence
Length: 100
FALAGLASFQDQRIWHHSRRMEETLNANSASLQIYLDELAKSFGGMEGAMSMLGRTIQRDAFVMTYNDVFLVMGVLTLMTVPLVIFLKPLPKNVSLSMH*