ggKbase home page

SCNpilot_expt_500_bf_scaffold_7761_6

Organism: SCNPILOT_EXPT_500_BF_STEP10_Sphingopyxis_65_8

near complete RP 50 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: 5710..6366

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding two-component response regulator n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UVM0_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 99.1
  • Coverage: 218.0
  • Bit_score: 420
  • Evalue 1.10e-114
  • rbh
DNA-binding two-component response regulator {ECO:0000313|EMBL:ENY82324.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.1
  • Coverage: 218.0
  • Bit_score: 420
  • Evalue 1.60e-114
transcriptional regulator; K02483 two-component system, OmpR family, response regulator similarity KEGG
DB: KEGG
  • Identity: 50.5
  • Coverage: 216.0
  • Bit_score: 210
  • Evalue 7.30e-52

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingopyxis sp. MC1 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 657
ATGCGCGTATTGCTGGTCGAAGACGATCCCGAACTGCGCCGCCGCCTGACCGAGCGGCTGGTGGCGGCGGGGATTGCCGTCGACAGCGCCGCGTCGGCGGGCGACGCCCGCGACTGGCCCGACATTGACATGCTGGGCGCGGTGATCCTCGATCTGGGGCTGCCCGACGGCGACGGGATTGATGTGCTGCGCCACTGGCGCGGCGCCGGGCGGACGGTGCCGATCTTGATCCTGACCGCGCGGGGCAACTGGCGCGAAAAGGTCGAGGGGCTGAACAGCGGCGCCGATGATTTCATCGTCAAGCCGGTGCGGTTCGAAGAGTTGTTGGCGCGGCTGCATGCGCTGTGGCGGCGTGGACGTGGGCGCGGCAGCAACGCGCTGACGGTCGGTCCGCTTTCGCTCGACCCCGTCGCGTCCACCGCGACGCTGCACGGCGAAGCGCTGACGCTCAGCCGCAAGGAGTTCGCGCTGCTGCACCTCTTCATGCGGCGTCCCGAACATATCTTGTCGCAAGCCGACATCCTCGATCAGCTTTACGCACTCGAAGCCGAGCGCGACCGCAACGCGGTGGAGGCGCATGTCAGTCGGTTGCGCCGCAAGATCGGACGCGACGCTATTCGCACCGTGCGCGGCCTGGGCTATCGGCTCGATTTGTGA
PROTEIN sequence
Length: 219
MRVLLVEDDPELRRRLTERLVAAGIAVDSAASAGDARDWPDIDMLGAVILDLGLPDGDGIDVLRHWRGAGRTVPILILTARGNWREKVEGLNSGADDFIVKPVRFEELLARLHALWRRGRGRGSNALTVGPLSLDPVASTATLHGEALTLSRKEFALLHLFMRRPEHILSQADILDQLYALEAERDRNAVEAHVSRLRRKIGRDAIRTVRGLGYRLDL*