ggKbase home page

SCNpilot_expt_500_bf_scaffold_14821_5

Organism: SCNPILOT_EXPT_500_BF_STEP10_Rhodanobacter_fragment_67_8

partial RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: 2074..3519

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane efflux protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5H2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 83.8
  • Coverage: 481.0
  • Bit_score: 766
  • Evalue 1.40e-218
  • rbh
Outer membrane efflux protein {ECO:0000313|EMBL:EIL94713.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.8
  • Coverage: 481.0
  • Bit_score: 766
  • Evalue 2.00e-218
outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 71.8
  • Coverage: 479.0
  • Bit_score: 643
  • Evalue 7.40e-182
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1446
ATGATGCGGGGCAAGCACTCCGCCACGCGTCATTCCGCTGCGAGCGCGCGCCGCGCCATGGTGCCGCCTCGCCATGGCCGCTGGGTCAGCCTGATGCTCGCCATGGCGGCGGGCCTGTCCGGTTGCGCCACCTACGCCGACTTGCCACTGGGCAGCGGCGCCGGGGCGGACAGCGTGGCGCAACTCACCGCGCCGACCTCGGCCATGCCGTTGCCCGCACTGGCGACACACCGCTTCGACCCCGGCGACGGCCTCGACGTGACCGAGGTGGCGATGCTGGCGGTGGCCAACAGCCCGCAGTTGCGCGTCAAGCGCGACGAGCTGGGCATTGCGCAGGCGCAGGCCTTCGCGGCCGGCCTGCTGCCCGATCCGCAACTGGCGTTGTCGGCGGATTTTCCACGCCAGTCCGGTGCCGGCCTCAGCACGGCCTACAGCCTGGGCCTGAGCGAAGACATCACGGCCTTGCTGACCCGTTCCTCGCGCCTGGCCACGGCACGCGGCCAGGCCAGCCAGGTCAATCTCGACCTGTTGTGGGCCGAGTGGCAGACCGTGGCGCAGGCGCGGCTGCTGTTCGACCAGGTAGTGAATCTGCGCGCGCAGCAGGCGCGACTCGAGCACGAGCAGGCGGCGCTTGCCACGGTCAGCGGCTACATCCGCAGCGCGCTGCAAGCGGGCAACCTCACCTACGACAGCGCCAGCGCCGGCCTGAATGCCGAAGCCGATGTGCACAAACGGCTGGCCGATACCGCGATCGCGCTGCATCAGGCCCAAAGCGATCTGCACCAGTTGCTGGGACTGGCACCGACGGCCACGCTCGACCTGGTCGGCCCGCCTTATTTCAGCCAGCCCACGCCGGCGCAAGTGCAGGCCGCGCTTGACGACCTGCCGCGTCGGCGGCCGGACCTGCTGGCGCTGCAGGCTGGCTACCAGTCGCAGCAGGCCAAGCTGCGCAGCGCGATCCTGGCCCAGTTCCCGGCACTGAATATCGGCTTCAACACCGCACGCGACACCAGCGCGGTCTACACCAACGGGCTCAGCATCGGCATCACCCTGCCGCTGTTCGATCGCAACCGCGGCAACATCGCGATCGAGCGGGCCACGCGCCAGCAGTTGCATGACGACTATGCGGCGCGGGTACTGGGCACGCGCGGTGACATGCAGCGGATCACCCGTGACCTGGCCACGCTCGATCAGCAACTGGCCACGCTCGGCGCGCATGCGCGGCAACTGGATCAGGCGCGCGCATCCGCCGAGCGTGCCTGGCAGGCCGGCATGCTGGACTGGCCCACGTATCTGGCGATACGCGGCAACGCCCTGGGCGCCGATCTCGACCTGCGCCAGGTGCAACTGGAGCGCGCCAAACAGTCGATCGCGCTGGAAGCGCTGCTGGGCAACACCGATCTGGCCGCCACCCATCCCGCCTCCACGCAAGCATCCCCGCCATGA
PROTEIN sequence
Length: 482
MMRGKHSATRHSAASARRAMVPPRHGRWVSLMLAMAAGLSGCATYADLPLGSGAGADSVAQLTAPTSAMPLPALATHRFDPGDGLDVTEVAMLAVANSPQLRVKRDELGIAQAQAFAAGLLPDPQLALSADFPRQSGAGLSTAYSLGLSEDITALLTRSSRLATARGQASQVNLDLLWAEWQTVAQARLLFDQVVNLRAQQARLEHEQAALATVSGYIRSALQAGNLTYDSASAGLNAEADVHKRLADTAIALHQAQSDLHQLLGLAPTATLDLVGPPYFSQPTPAQVQAALDDLPRRRPDLLALQAGYQSQQAKLRSAILAQFPALNIGFNTARDTSAVYTNGLSIGITLPLFDRNRGNIAIERATRQQLHDDYAARVLGTRGDMQRITRDLATLDQQLATLGAHARQLDQARASAERAWQAGMLDWPTYLAIRGNALGADLDLRQVQLERAKQSIALEALLGNTDLAATHPASTQASPP*