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SCNpilot_expt_500_bf_scaffold_14821_6

Organism: SCNPILOT_EXPT_500_BF_STEP10_Rhodanobacter_fragment_67_8

partial RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: 3715..4548

Top 3 Functional Annotations

Value Algorithm Source
RND family efflux transporter MFP subunit n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W5H1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 87.4
  • Coverage: 254.0
  • Bit_score: 437
  • Evalue 8.60e-120
RND family efflux transporter MFP subunit {ECO:0000313|EMBL:EIL94712.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.4
  • Coverage: 254.0
  • Bit_score: 437
  • Evalue 1.20e-119
RND family efflux transporter, MFP subunit similarity KEGG
DB: KEGG
  • Identity: 78.7
  • Coverage: 254.0
  • Bit_score: 398
  • Evalue 2.40e-108

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 834
ATGCGCGCTCGATCAGTCTCGCCCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGATCCGGCGGCGCGCAGCGCCTACCAGCAGGCGCAGACCGCCCTGACCCTCGCCACGGGCGAGCTCAAGCGCACCGAACAACTGGCGTCGCAGCGGCTGGCCACGCAATCGCAATTGGCCACGGCGCGCAAGGCGCTGGCCGATGCGCAGTCGGCGCTGGACGCCCAACGGGCGCTGGGCGGCGGCGCGGCCAGCGAAACCGTCGATGCGCCGGCCGATGGGCTGGTCACCAGCTTGCAGGTCGGCCTCGGCGAACGGGTGGCGGCGAACGCGCCCTTGCTCAGCTTCACGCCCACCCAGGCCCTGCTCGCCGTGCTCGGCGTGCAGCCGGACGATGGCGCGCGGCTGCGCCCGGGGATGCCGGTGCAGTTGCAGCCGGTTTATGGCTCGCGCGAAACCTTTGTCGGCACGCTGCGCATGGTTGGCCAGTCGATCGATCCGCAGACCCACCTGCTCAACGCCCAGGTCGAATTGCCGGCCGCCGCCAGCGCCAGCCTGGTCGCGGGCGCGCCCCTGGATGCGCAGATCCACGCCGCGGATTTCACCGCATGGGCGGTGCCGCGCGGCGCCGTGTTGCACGACGAGCATGGCGACTATCTGTTTCAGGTCGAACACGGCCACGCCAAGCGGATCAAGGTGACCCTGCGCAGCGGGCAAGGCGACCCGGTGGGCGTGGACGGGCCGCTGGATGCGAAGGCCAGGGTCGTCGTGCTGGGCGTGTATGAACTCAACGACGGCGATGCGGTGCGGGAGGCGGCCAAGTGA
PROTEIN sequence
Length: 278
MRARSVSPXXXXXXXXXXXXXXXDPAARSAYQQAQTALTLATGELKRTEQLASQRLATQSQLATARKALADAQSALDAQRALGGGAASETVDAPADGLVTSLQVGLGERVAANAPLLSFTPTQALLAVLGVQPDDGARLRPGMPVQLQPVYGSRETFVGTLRMVGQSIDPQTHLLNAQVELPAAASASLVAGAPLDAQIHAADFTAWAVPRGAVLHDEHGDYLFQVEHGHAKRIKVTLRSGQGDPVGVDGPLDAKARVVVLGVYELNDGDAVREAAK*