ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2678_11

Organism: SCNpilot_expt_1000_bf_UNK

megabin RP 54 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 27 / 38 MC: 18
Location: 8795..9904

Top 3 Functional Annotations

Value Algorithm Source
heavy metal efflux pump CzcA; K07787 Cu(I)/Ag(I) efflux system membrane protein CusA id=12498615 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 96.8
  • Coverage: 375.0
  • Bit_score: 702
  • Evalue 2.50e-199
Cation transporter {ECO:0000313|EMBL:KGS16462.1}; TaxID=53409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas coronafaciens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.8
  • Coverage: 376.0
  • Bit_score: 620
  • Evalue 1.80e-174
heavy metal efflux pump CzcA; K07787 Cu(I)/Ag(I) efflux system membrane protein CusA similarity KEGG
DB: KEGG
  • Identity: 82.7
  • Coverage: 375.0
  • Bit_score: 607
  • Evalue 2.60e-171

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas coronafaciens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1110
ATGATCGCGCACCTCATCAAGTGGTCTGTCGCCAACCGTTTTCTGGTTCTGCTGGCGACCCTGTTTACCGTGGCGTGGGGGATTTGGTCGGTGAAAACCACGCCGATCGACGCACTGCCAGATCTGTCCGATGTACAGGTCATCATCCGAACTTCCTATCCGGGACAGGCGCCGCAGATCGTGGAGAACCAGGTCACGTATCCGCTTGCCACCACCATGTTGTCGGTGCCGGGGGCGAAGACGGTGCGCGGGTTTTCCTTCTTTGGCGACAGCTTTGTCTATGTCATTTTCGAAGACGGCACCGATCTGTACTGGGCGCGGTCGCGGGTGCTGGAATATCTCAGTCAGGTGCAGGCTCGCCTACCCGCGACGGCTAAACCGGCGCTGGGACCCGACGCCACCGGTGTGGGCTGGATCTACGAATATGCGCTCGTCGACAGGACCGGGCACCATGATCTGGCACAGTTGCGCGCCTTGCAGGACTGGTTCCTGAAATTCGCCGAAGTGGCTACGGTGGGCGGCATGGTCAAGCAGTATCAGGTCGTGCTCGACCCCGTCAAACTTGCCGGCCTTGGTATTACGCAGGCCGAAGTGAAGGATGCCATTACCAAGGCAAACCAGGAGAGCGGCGGATCGGTGCTGACACTCGGCGAAGCCGAACTGATGGTACGCGCCAGCGGCTACCTGAAATCGCTTACCGATTTCCGGTCCATTCCGCTCAAGCTCGTGAACGGGGTGCCGGTCCTTCTCGGCGACGTGGCGGCCATCCAGCTCGGTCCGGAAATGCGGCGCGGCATCGCGGAACTGGATGGCCAAGGCGAAACGGTCGGCGGCGTGGTCATTCTGCGTAGTGGCAAGAACGCGCGTGAGACTATCGCGGCGGTGCACGCGAAGCTGGAACAACTCAAGGCCAGCCTGCCCAAGGGCGTGGAAATCGTCACGACCTACGACCGCAGCAAGCTGATCGACCGGGCGGTGGAAAACCTTACCCATAAACTCATCGAAGAGTTTATCGTCGTCGCGCTGGTGTGCGCCCTGTTCCTGTGGCATGTGCGTTCGTCGCTGGTGGCCATCGTGTCGCTGCCGCTGGCATGCGTTATCAGAACGTGA
PROTEIN sequence
Length: 370
MIAHLIKWSVANRFLVLLATLFTVAWGIWSVKTTPIDALPDLSDVQVIIRTSYPGQAPQIVENQVTYPLATTMLSVPGAKTVRGFSFFGDSFVYVIFEDGTDLYWARSRVLEYLSQVQARLPATAKPALGPDATGVGWIYEYALVDRTGHHDLAQLRALQDWFLKFAEVATVGGMVKQYQVVLDPVKLAGLGITQAEVKDAITKANQESGGSVLTLGEAELMVRASGYLKSLTDFRSIPLKLVNGVPVLLGDVAAIQLGPEMRRGIAELDGQGETVGGVVILRSGKNARETIAAVHAKLEQLKASLPKGVEIVTTYDRSKLIDRAVENLTHKLIEEFIVVALVCALFLWHVRSSLVAIVSLPLACVIRT*