ggKbase home page

SCNpilot_expt_1000_bf_scaffold_19427_1

Organism: SCNpilot_expt_1000_bf_UNK

megabin RP 54 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 27 / 38 MC: 18
Location: comp(2..1543)

Top 3 Functional Annotations

Value Algorithm Source
RNA-directed DNA polymerase n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EKS8_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 89.7
  • Coverage: 514.0
  • Bit_score: 961
  • Evalue 3.20e-277
  • rbh
RNA-directed DNA polymerase (Reverse transcriptase) similarity KEGG
DB: KEGG
  • Identity: 55.6
  • Coverage: 507.0
  • Bit_score: 581
  • Evalue 3.70e-163
  • rbh
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 93.7
  • Coverage: 508.0
  • Bit_score: 995
  • Evalue 2.80e-287

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Sphingopyxis_65_20 → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1542
ATGACGGAGGAACTATCAGTGGACTCTGATAATCAAGCCCCACAGGCTTGGCTCCTCGGCGTTCAGCGAAAGCTCTACCAGTGGAGTCGGGAAAACCCCGAAGAACCATATCGCGACTTGTGGAATTGGGTCACCGATCACCGCAACTTGCATATGGCCTGGAGGACAATTGCCGGAAATCGCGGCAAGCGCACTCCGGGGGTCGACGGGGCGACCGTAGAGAAAATTGCGACCGGTATTGGCATCGACAAATTCCTTCATGAGCTTCGCGAGGAACTCCGGGCGGACGAATATCGTCCGTCTCCTGCACGAAGGAAGTGGATTCCAAAGCCGGGCAAACCGGGGAAGTTCCGACCCCTCGGTATCCCTACGGTCAAGGATCGCGTGGTGCAGTGCGCGATCAAACAAGTTCTGGAGCCGATCTTCGAGGCCCGGTTCTGGCCTGTTTCATACGGGTTCCGGCCCGGACGCGGCAGTCAGGCCTGTCTCGAACATATCCGTGTGACCATCCAGTCGCGGGGTAAACCTGCGGCTGATGGCTATCGACATAGATCGCCGTACCAATGGGTCATCGAAGGCGACATTGAGGCCTGTTTCGACAATATCGGCCATCACCCGCTGATGGAACGCGTGCGCCACGGCGTCGCAGACCTCAAGGTGAACCGGTTGATCGTACAGTTTCTCAAGGCCGGGGTCTTGGAGCATGTCACGTACAGCCCCACCGACACCGGCACGCCGCAAGGAGGCGTGCTCTCGCCGTTGCTTGCCAACATCGCGCTTGGCGTGATCGAGGAACGGTATCGGGATTGGGTACGTCGCCCCGAAAACCCAGAGCTGAAATCCGATGGGATCAGGCTCGCGGCGATCAAGCGTGATAAGGATCGTAAGGCCGGTCGAACGGTCTTCTACCCTGTCCGCTATGCCGACGACTTCCTGATCTTCGTGTCAGGGACGGAGGCTGACGCCCTTGCTGAAAAGCAGGCGCTGGCAACCTATCTGCACGAGGCGATGGGTCTGACGCTCTCGCCCGAAAAGACGCGCGTCACTGCGCTGACCGAAGGCTGTCGGTTCTTGGGGTGCCGGGTGCGGCTCAAGTGGGACAAGCGATTCGGGCTTCATGCTCGTATCGAAATCCCCCGCGAGCCGATCAACCGTTTCCGCATACGGGTCAATCAACTGGCGCGGCGGCAGACGCTTCGGCGTTCGCTGGCGGCCATGCTTCAGGAACTCAATCCATACCTTCGGGGATGGTCCGCTTATTATCGCTACTGCGTGGGGTCCAAGCGCATCTTTGCCAGTCTCGACTGGCATGTGCGCCAACGCCTCTGGCTGTGGCTGCGGGCTAAACACAAGCGTGTCCCGGGAAGGAAGATCGCATCGGTGCGCAGGCAGAGTGTTGCCCATCCGGGCACCATGGTCTGGGCTGAAGGACGTACGGAGCAATTCTTGATGAGCTACGTACCCGTCCACCGGTTCGATCTCAAATGGATGAGAAAACCCGAATTCGCCAAGACTTCTGGAGAGCCGGATGCACAACGAAAG
PROTEIN sequence
Length: 514
MTEELSVDSDNQAPQAWLLGVQRKLYQWSRENPEEPYRDLWNWVTDHRNLHMAWRTIAGNRGKRTPGVDGATVEKIATGIGIDKFLHELREELRADEYRPSPARRKWIPKPGKPGKFRPLGIPTVKDRVVQCAIKQVLEPIFEARFWPVSYGFRPGRGSQACLEHIRVTIQSRGKPAADGYRHRSPYQWVIEGDIEACFDNIGHHPLMERVRHGVADLKVNRLIVQFLKAGVLEHVTYSPTDTGTPQGGVLSPLLANIALGVIEERYRDWVRRPENPELKSDGIRLAAIKRDKDRKAGRTVFYPVRYADDFLIFVSGTEADALAEKQALATYLHEAMGLTLSPEKTRVTALTEGCRFLGCRVRLKWDKRFGLHARIEIPREPINRFRIRVNQLARRQTLRRSLAAMLQELNPYLRGWSAYYRYCVGSKRIFASLDWHVRQRLWLWLRAKHKRVPGRKIASVRRQSVAHPGTMVWAEGRTEQFLMSYVPVHRFDLKWMRKPEFAKTSGEPDAQRK