ggKbase home page

SCNpilot_expt_1000_bf_scaffold_32714_3

Organism: SCNpilot_expt_1000_bf_UNK

megabin RP 54 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 27 / 38 MC: 18
Location: comp(1066..1404)

Top 3 Functional Annotations

Value Algorithm Source
phage integrase family protein id=12498573 bin=THIO_MID species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 97.2
  • Coverage: 106.0
  • Bit_score: 212
  • Evalue 1.80e-52
Integrase {ECO:0000313|EMBL:CBH97703.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.7
  • Coverage: 105.0
  • Bit_score: 197
  • Evalue 8.60e-48
CP4-like integrase similarity KEGG
DB: KEGG
  • Identity: 78.1
  • Coverage: 105.0
  • Bit_score: 181
  • Evalue 1.40e-43

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

mine drainage metagenome

Sequences

DNA sequence
Length: 339
GTGCATGTCCAATGCCACGGGGTCACGCAACTGATCGTCGAACGCGCGAAGGCGAACAAGCTCCCGCTGGAGCCCTTCACCGTGCATGACCTGCGGCGTACGGGTTCAACCATCCTGAACGAACTTGGCTTCAACAGCGACTGGATCGAGAAGTGCCTGGCCCACGAAGACGGCCGTTCATCCCGTGGCGTTTACAACAAGGCAGAATATGCTGAGCAGCGCCGTCACATGCTGCAGGAATGGGCCGACATGATTGACGCTTGGGTGGCGGGCAAGCCGCATACACCTACGCTGCTGCCGCCATCGATGAAGGTTCTCACGACGCAGGCGCTGCTTTGA
PROTEIN sequence
Length: 113
VHVQCHGVTQLIVERAKANKLPLEPFTVHDLRRTGSTILNELGFNSDWIEKCLAHEDGRSSRGVYNKAEYAEQRRHMLQEWADMIDAWVAGKPHTPTLLPPSMKVLTTQALL*