ggKbase home page

SCNpilot_expt_1000_bf_scaffold_33869_1

Organism: SCNpilot_expt_1000_bf_UNK

megabin RP 54 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 27 / 38 MC: 18
Location: 1..390

Top 3 Functional Annotations

Value Algorithm Source
Efflux pump inner membrane protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IKJ1_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 90.5
  • Coverage: 116.0
  • Bit_score: 205
  • Evalue 4.40e-50
efflux pump inner membrane protein similarity KEGG
DB: KEGG
  • Identity: 90.5
  • Coverage: 116.0
  • Bit_score: 205
  • Evalue 1.40e-50
Efflux pump inner membrane protein {ECO:0000313|EMBL:BAK65054.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.5
  • Coverage: 116.0
  • Bit_score: 205
  • Evalue 6.20e-50

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobium sp. SYK-6 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 390
GAGGCCGTGCAGAACAGTGTCACGCAGATCATCGAGCAATCGCTCAACGGCATCGACGGCCTGCTCTATTTCACTTCTTCCTCCGACGCGCGCGGCCGCGCGAACATCACGGCGACCTTCTCCAAAGGGACCGACCCGGACATCGCGCAGGTGCAGGTGCAAAACCAGCTCCAGTCGGTCATCGCCCGCCTGCCACAGCAGGTGCAGCAGAACGGCGTGCAGGTCCGCAAGTCGAACAACGACATTCTGCTCATCACTGGCATTTACGACGCCTCGAACCGGATGAGCCCGCAGCAGGTTTCGGATTACCCCTCCTCCAATCTGCAGGATGCGCTCAGTCGCGTGCCCCGGCTCGCCCAATGCGATGCGCGTCTGGCTCAATCCGGATAG
PROTEIN sequence
Length: 130
EAVQNSVTQIIEQSLNGIDGLLYFTSSSDARGRANITATFSKGTDPDIAQVQVQNQLQSVIARLPQQVQQNGVQVRKSNNDILLITGIYDASNRMSPQQVSDYPSSNLQDALSRVPRLAQCDARLAQSG*