ggKbase home page

SCNpilot_expt_1000_bf_scaffold_37860_2

Organism: SCNpilot_expt_1000_bf_UNK

megabin RP 54 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 27 / 38 MC: 18
Location: 1453..1620

Top 3 Functional Annotations

Value Algorithm Source
lytic transglycosylase catalytic subunit; K08309 soluble lytic murein transglycosylase [EC:3.2.1.-] similarity KEGG
DB: KEGG
  • Identity: 60.7
  • Coverage: 56.0
  • Bit_score: 71
  • Evalue 7.90e-11
Lytic transglycosylase, catalytic n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WM65_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 64.3
  • Coverage: 56.0
  • Bit_score: 75
  • Evalue 1.70e-11
Lytic transglycosylase, catalytic {ECO:0000313|EMBL:EIZ81383.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. Rr 2-17.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.3
  • Coverage: 56.0
  • Bit_score: 75
  • Evalue 2.40e-11

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium sp. Rr 2-17 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 168
ATGGCCGCCGCCTATCCGGACCGGTTCTACGGCATGCTCGCGCTCGAGCGCCTCGGCAGGCCCATACCTCCCTTCAACGGCAGCCCGGGCGCAGTCCCCAGTTCCGACCAGCGGCAGGATTTCTATTCCCGGCCGCTGACCCGGGCCGTGCGCGAAGTCGCCCGCGAC
PROTEIN sequence
Length: 56
MAAAYPDRFYGMLALERLGRPIPPFNGSPGAVPSSDQRQDFYSRPLTRAVREVARD