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SCNpilot_expt_1000_bf_scaffold_40124_1

Organism: SCNpilot_expt_1000_bf_UNK

megabin RP 54 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 27 / 38 MC: 18
Location: comp(3..200)

Top 3 Functional Annotations

Value Algorithm Source
RhoGEF domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff RepID=L8GVJ9_ACACA similarity UNIREF
DB: UNIREF100
  • Identity: 52.6
  • Coverage: 57.0
  • Bit_score: 65
  • Evalue 2.80e-08
RhoGEF domain containing protein similarity KEGG
DB: KEGG
  • Identity: 52.6
  • Coverage: 57.0
  • Bit_score: 65
  • Evalue 8.70e-09
RhoGEF domain containing protein {ECO:0000313|EMBL:ELR16598.1}; TaxID=1257118 species="Eukaryota; Amoebozoa; Discosea; Longamoebia; Centramoebida; Acanthamoebidae; Acanthamoeba.;" source="Acanthamoeba castellanii str. Neff.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.6
  • Coverage: 57.0
  • Bit_score: 65
  • Evalue 3.90e-08

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Taxonomy

Acanthamoeba castellanii → Acanthamoeba → Longamoebia → Eukaryota

Sequences

DNA sequence
Length: 198
TTGGCGAAAGTTCAAGCAAACTTGCAAGATCTGGCCTCATTTTTAATCAAACCCCTTCAACGGATCACCAAGTACCCCTTGTTACTTAATGAGCTTCTGAAGGAACTGCCGCAAGAGAATCCTGACGTTCCAAAAATTATCGAAGCTAAAACAGCTATTGAAAGATTAGTCAATGCAACTAACGAGACCAAGCGTGTT
PROTEIN sequence
Length: 66
LAKVQANLQDLASFLIKPLQRITKYPLLLNELLKELPQENPDVPKIIEAKTAIERLVNATNETKRV