ggKbase home page

SCNpilot_expt_1000_bf_scaffold_46064_3

Organism: SCNpilot_expt_1000_bf_UNK

megabin RP 54 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 27 / 38 MC: 18
Location: 775..990

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.9
  • Coverage: 70.0
  • Bit_score: 113
  • Evalue 1.80e-22
truA; pseudouridylate synthase; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] similarity KEGG
DB: KEGG
  • Identity: 76.1
  • Coverage: 71.0
  • Bit_score: 105
  • Evalue 8.30e-21
tRNA pseudouridine synthase A n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AWI7_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 81.4
  • Coverage: 70.0
  • Bit_score: 111
  • Evalue 3.70e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium hominis → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 216
ATGGTGCGCGCCCTCGTCGGCGCGTGCGCCGCGGTGGGCGAGGGCAAGCTCGAGCCTGAGGACGTCGCGGAGATCCGCGACGAGGGCGTGCGCACGAGTGAGACGAAAGTGCTCGCGGCGCGCGGACTCACGCTCACCGAAGTGGGATACCCGGCCGACGACCTGCTCGCCGCGCGCGCCGACCAGACCCGCGCGCGCCGCGCGCTCGACGACTGA
PROTEIN sequence
Length: 72
MVRALVGACAAVGEGKLEPEDVAEIRDEGVRTSETKVLAARGLTLTEVGYPADDLLAARADQTRARRALDD*