ggKbase home page

SCNpilot_expt_1000_bf_scaffold_55140_2

Organism: SCNpilot_expt_1000_bf_UNK

megabin RP 54 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 27 / 38 MC: 18
Location: 365..1081

Top 3 Functional Annotations

Value Algorithm Source
Putative conjugal transfer TrbJ signal peptide protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VV04_POLNA similarity UNIREF
DB: UNIREF100
  • Identity: 85.5
  • Coverage: 242.0
  • Bit_score: 393
  • Evalue 2.10e-106
Conjugal transfer protein TrbJ {ECO:0000313|EMBL:AJP47673.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1-Ca6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.8
  • Coverage: 242.0
  • Bit_score: 410
  • Evalue 1.80e-111
conjugal transfer protein TrbJ similarity KEGG
DB: KEGG
  • Identity: 85.5
  • Coverage: 242.0
  • Bit_score: 393
  • Evalue 6.60e-107

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodocyclaceae bacterium PG1-Ca6 → Rhodocyclales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 717
ATGAAGAAAACCCTTCTTGCCGTCGCCGCCGCCGTACTCATGACCGTGATGCCCGCTGCGCAGGCGGTATGGGTGGTCATCGACCCATCAAACCTGACGCAGAACATCATGACCGCTGCGCGCACACTGGAACAGATCAACAACCAGATCAGGCAGCTGCAGAACGAAGCGCAGATGCTGATGAACCAGGCGAAGAATCTGACAGGCCTGAACTTCAGTGCGCTCAATGAACTGCGTTCGGCGCTGTCCGCGACGAACCAGTTGATCCAGCAGGCACAGGGGCTGGCCTTCAATGTGTCGCAGATGGAAACCGAGTTCGCGCGGCTCTACACCGCCTCCGCCTCGGGTAGCCAGATGGCCATCGATGCACGCACGCGCTGGCGCAACTCGTTGGAGGCGCTGCGCACCGCGACCAAGGTGCAGTCGCAGGCGGTGCAGAACTTCGCGTCCGACGAGCAGACCTTGACCGACCTGGTGAACCGCAGCCAGTCGGCGGTCGGCGCGTTACAAGCCACGCAGGCGACGAACCAGTTGCTGGCCCTGCAGGCCCGGCAGGCGATCCAGGCGCAGCAGCTTCAGATCACCCAAGATCGTGCCACCGCCCTGGAACAGGCACGGCAGATCGCAGTGCAGGAGCGTGCCCGTGAAGTGCGCCGCCGCTTCCAGGGCGAAGGCACGCCCTACACGCCATACAGCGTCAACTACTACGGCAATTGA
PROTEIN sequence
Length: 239
MKKTLLAVAAAVLMTVMPAAQAVWVVIDPSNLTQNIMTAARTLEQINNQIRQLQNEAQMLMNQAKNLTGLNFSALNELRSALSATNQLIQQAQGLAFNVSQMETEFARLYTASASGSQMAIDARTRWRNSLEALRTATKVQSQAVQNFASDEQTLTDLVNRSQSAVGALQATQATNQLLALQARQAIQAQQLQITQDRATALEQARQIAVQERAREVRRRFQGEGTPYTPYSVNYYGN*