ggKbase home page

SCNpilot_expt_1000_bf_scaffold_77860_2

Organism: SCNpilot_expt_1000_bf_UNK

megabin RP 54 / 55 MC: 53 BSCG 51 / 51 MC: 51 ASCG 27 / 38 MC: 18
Location: 766..1059

Top 3 Functional Annotations

Value Algorithm Source
signal transduction protein id=5083149 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD similarity UNIREF
DB: UNIREF100
  • Identity: 84.7
  • Coverage: 98.0
  • Bit_score: 170
  • Evalue 6.90e-40
signal transduction protein similarity KEGG
DB: KEGG
  • Identity: 69.7
  • Coverage: 99.0
  • Bit_score: 143
  • Evalue 2.90e-32
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 84.7
  • Coverage: 98.0
  • Bit_score: 170
  • Evalue 9.70e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Burkholderiales_67_14 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 294
ATGTTCGAGCTGTTCGAGGGCGCCAGCGAAGGCATGCTGCTGGTCGACCGCGACGCGCGCGTGGTGTGGATCAACGACCCCTACCGGCGCTTTCTGCCGGCGCTGGGCTACGAGCGCGAGGAGGACTTCGTCGGCCACCCGGTGTCCGACGTGGTGCAGAACACGCAGATGCACCAGGTGCTGCGCACCGGCAAGCCGATGCTGATCGACCTGCTGAGCAACCGCGCCGGCACCTTCGCGGTCAGCCGCATTCCGCTGCGCGACGACGCCGGCGAGGGGATCGGCGCGCTGGGC
PROTEIN sequence
Length: 98
MFELFEGASEGMLLVDRDARVVWINDPYRRFLPALGYEREEDFVGHPVSDVVQNTQMHQVLRTGKPMLIDLLSNRAGTFAVSRIPLRDDAGEGIGALG