ggKbase home page

AMDSBA5_6_8 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
transcriptional regulator, GntR family similarity KEGG
DB: KEGG
31.8 236.0 119 1.30e-24 tki:TKV_c04440
Chorismate lyase-like (db=superfamily db_id=SSF64288 from=80 to=235 evalue=9.7e-26) iprscan interpro
DB: superfamily
null null null 9.70e-26 tki:TKV_c04440
(db=HMMPfam db_id=PF07702 from=93 to=226 evalue=3.9e-23 interpro_id=IPR011663 interpro_description=UbiC transcription regulator-associated GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
null null null 3.90e-23 tki:TKV_c04440
(db=HMMPfam db_id=PF00392 from=23 to=68 evalue=8.7e-17 interpro_id=IPR000524 interpro_description=Transcription regulator HTH, GntR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
null null null 8.70e-17 tki:TKV_c04440
no description (db=HMMSmart db_id=SM00866 from=92 to=231 evalue=3.1e-16 interpro_id=IPR011663 interpro_description=UbiC transcription regulator-associated GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMSmart
null null null 3.10e-16 tki:TKV_c04440
no description (db=HMMSmart db_id=SM00345 from=12 to=69 evalue=1.0e-14 interpro_id=IPR000524 interpro_description=Transcription regulator HTH, GntR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMSmart
null null null 1.00e-14 tki:TKV_c04440
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=1 to=117 evalue=1.2e-13) iprscan interpro
DB: superfamily
null null null 1.20e-13 tki:TKV_c04440
HTHGNTR (db=FPrintScan db_id=PR00035 from=29 to=43 evalue=7.4e-11 interpro_id=IPR000524 interpro_description=Transcription regulator HTH, GntR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null null null 7.40e-11 tki:TKV_c04440
HTHGNTR (db=FPrintScan db_id=PR00035 from=43 to=59 evalue=7.4e-11 interpro_id=IPR000524 interpro_description=Transcription regulator HTH, GntR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null null null 7.40e-11 tki:TKV_c04440
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=5 to=72 evalue=8.1e-11 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) iprscan interpro
DB: Gene3D
null null null 8.10e-11 tki:TKV_c04440
HTH_GNTR (db=ProfileScan db_id=PS50949 from=5 to=72 evalue=19.183 interpro_id=IPR000524 interpro_description=Transcription regulator HTH, GntR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: ProfileScan
null null null 1.92e+01 tki:TKV_c04440
Uncharacterized protein {ECO:0000313|EMBL:KEO84181.1}; TaxID=1157490 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Tumebacillus.;" source="Tumebacillus flagellatus.;" UNIPROT
DB: UniProtKB
34.2 234.0 125 9.10e-26 A0A074LPX9_9BACL
Transcriptional regulator n=1 Tax=Gracilibacillus halophilus YIM-C55.5 RepID=N4WP21_9BACI similarity UNIREF
DB: UNIREF90
32.1 null 124 4.50e-26 tki:TKV_c04440