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This organism can only be binned in the context of its binning project DPANN_genomes_binning. Please contact the project owner (jbanfield@berkeley.edu) to become a member and gain access.

AMDSBA5_8_44 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
C-terminal effector domain of the bipartite response regulators (db=superfamily db_id=SSF46894 from=95 to=181 evalue=5.5e-14 interpro_id=IPR016032 interpro_description=Signal transduction response regulator, C-terminal effector GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Molecular Function: DNA binding (GO:0003677), Cellular Component: intracellular (GO:0005622), Biological Process: r iprscan interpro
DB: superfamily
null null null 5.50e-14
(db=HMMPfam db_id=PF00196 from=116 to=155 evalue=4.5e-12 interpro_id=IPR000792 interpro_description=Transcription regulator LuxR, C-terminal GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sequence-specific DNA binding (GO:0043565)) iprscan interpro
DB: HMMPfam
null null null 4.50e-12
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=106 to=175 evalue=1.0e-10 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) iprscan interpro
DB: Gene3D
null null null 1.00e-10
no description (db=HMMSmart db_id=SM00421 from=114 to=171 evalue=2.9e-09 interpro_id=IPR000792 interpro_description=Transcription regulator LuxR, C-terminal GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sequence-specific DNA binding (GO:0043565)) iprscan interpro
DB: HMMSmart
null null null 2.90e-09
HTHLUXR (db=FPrintScan db_id=PR00038 from=131 to=147 evalue=5.4e-09 interpro_id=IPR000792 interpro_description=Transcription regulator LuxR, C-terminal GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sequence-specific DNA binding (GO:0043565)) iprscan interpro
DB: FPrintScan
null null null 5.40e-09
HTHLUXR (db=FPrintScan db_id=PR00038 from=147 to=159 evalue=5.4e-09 interpro_id=IPR000792 interpro_description=Transcription regulator LuxR, C-terminal GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sequence-specific DNA binding (GO:0043565)) iprscan interpro
DB: FPrintScan
null null null 5.40e-09
HTHLUXR (db=FPrintScan db_id=PR00038 from=117 to=131 evalue=5.4e-09 interpro_id=IPR000792 interpro_description=Transcription regulator LuxR, C-terminal GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sequence-specific DNA binding (GO:0043565)) iprscan interpro
DB: FPrintScan
null null null 5.40e-09
PAS (db=ProfileScan db_id=PS50112 from=9 to=38 evalue=8.784 interpro_id=IPR000014 interpro_description=PAS GO=Molecular Function: signal transducer activity (GO:0004871), Biological Process: signal transduction (GO:0007165)) iprscan interpro
DB: ProfileScan
null null null 8.78e+00
HTH_LUXR_2 (db=ProfileScan db_id=PS50043 from=110 to=175 evalue=15.978 interpro_id=IPR000792 interpro_description=Transcription regulator LuxR, C-terminal GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sequence-specific DNA binding (GO:0043565)) iprscan interpro
DB: ProfileScan
null null null 1.60e+01
Uncharacterized protein {ECO:0000313|EMBL:EPD62900.1}; TaxID=1078086 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HGB0020.;" UNIPROT
DB: UniProtKB
53.7 54.0 59 4.70e-06 S2YL99_9ACTN
Two component transcriptional regulator, LuxR family n=1 Tax=Streptomyces violaceusniger Tu 4113 RepID=G2P1R3_STRVO similarity UNIREF
DB: UNIREF90
39.4 null 57 5.20e-06