ggKbase home page

AMDSBA5_10_9
Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
LysR family transcriptional regulator similarity KEGG
DB: KEGG
43.6 291.0 239 1.40e-60 sap:Sulac_0875
Putative LysR family transcriptional regulator n=1 Tax=Gordonia amarae NBRC 15530 RepID=G7GTY4_9ACTO (db=UNIREF evalue=1.9e-15 bit_score=89.0 identity=26.3 coverage=88.13559322033898) similarity UNIREF
DB: UNIREF
26.3 88.14 89 1.90e-15 sap:Sulac_0875
(db=HMMPfam db_id=PF03466 from=87 to=288 evalue=1.6e-46 interpro_id=IPR005119 interpro_description=LysR, substrate-binding) iprscan interpro
DB: HMMPfam
null
null
null
1.60e-46 sap:Sulac_0875
Periplasmic binding protein-like II (db=superfamily db_id=SSF53850 from=85 to=291 evalue=1.3e-41) iprscan interpro
DB: superfamily
null
null
null
1.30e-41 sap:Sulac_0875
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=1 to=111 evalue=1.1e-29) iprscan interpro
DB: superfamily
null
null
null
1.10e-29 sap:Sulac_0875
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=1 to=87 evalue=1.1e-23 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) iprscan interpro
DB: Gene3D
null
null
null
1.10e-23 sap:Sulac_0875
(db=HMMPfam db_id=PF00126 from=3 to=61 evalue=1.5e-23 interpro_id=IPR000847 interpro_description=Transcription regulator HTH, LysR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: HMMPfam
null
null
null
1.50e-23 sap:Sulac_0875
no description (db=Gene3D db_id=G3DSA:3.40.190.10 from=89 to=173 evalue=4.3e-13) iprscan interpro
DB: Gene3D
null
null
null
4.30e-13 sap:Sulac_0875
HTHLYSR (db=FPrintScan db_id=PR00039 from=18 to=29 evalue=6.2e-09 interpro_id=IPR000847 interpro_description=Transcription regulator HTH, LysR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null
null
null
6.20e-09 sap:Sulac_0875
HTHLYSR (db=FPrintScan db_id=PR00039 from=29 to=39 evalue=6.2e-09 interpro_id=IPR000847 interpro_description=Transcription regulator HTH, LysR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null
null
null
6.20e-09 sap:Sulac_0875
HTHLYSR (db=FPrintScan db_id=PR00039 from=39 to=50 evalue=6.2e-09 interpro_id=IPR000847 interpro_description=Transcription regulator HTH, LysR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: FPrintScan
null
null
null
6.20e-09 sap:Sulac_0875
HTH_LYSR (db=ProfileScan db_id=PS50931 from=1 to=58 evalue=33.809 interpro_id=IPR000847 interpro_description=Transcription regulator HTH, LysR GO=Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355)) iprscan interpro
DB: ProfileScan
null
null
null
3.38e+01 sap:Sulac_0875
Uncharacterized protein {ECO:0000313|EMBL:AEW04378.1}; TaxID=679936 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source="Sulfob UNIPROT
DB: UniProtKB
43.6 291.0 239 6.70e-60 G8TS52_SULAD
Transcriptional regulator, LysR family n=2 Tax=Sulfobacillus acidophilus RepID=F8I6U8_SULAT similarity UNIREF
DB: UNIREF90
43.6
null
238 2.00e-60 sap:Sulac_0875