| Value | Algorithm | Source | Identity | Coverage | Bit score | Evalue | Cross references |
|---|---|---|---|---|---|---|---|
| RNA polymerase sigma-subunit RpoX/SigF | rbh |
KEGG
DB: KEGG |
74.6 | 240.0 | 368 | 1.30e-99 | sap:Sulac_1786 |
| RNA polymerase sigma-subunit RpoX/SigF | similarity |
KEGG
DB: KEGG |
74.6 | 240.0 | 368 | 1.30e-99 | sap:Sulac_1786 |
| RNA polymerase sigma factor n=2 Tax=Sulfobacillus acidophilus RepID=G8U030_9FIRM (db=UNIREF evalue=1.4e-99 bit_score=368.2 identity=74.6 coverage=92.27799227799228) | similarity |
UNIREF
DB: UNIREF |
74.6 | 92.28 | 368 | 1.40e-99 | sap:Sulac_1786 |
| rbh | rbh |
UNIREF
DB: UNIREF |
null | null | null | null | sap:Sulac_1786 |
| SIGMA70_2 (db=PatternScan db_id=PS00716 from=217 to=243 evalue=0.0 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: PatternScan |
null | null | null | 0.0 | sap:Sulac_1786 |
| SIGMA70_1 (db=PatternScan db_id=PS00715 from=57 to=70 evalue=0.0 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: PatternScan |
null | null | null | 0.0 | sap:Sulac_1786 |
| SigBFG: RNA polymerase sigma-70 factor, s (db=HMMTigr db_id=TIGR02980 from=26 to=248 evalue=1.0e-101 interpro_id=IPR014322 interpro_description=RNA polymerase sigma-B/F/G type GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity | iprscan |
interpro
DB: HMMTigr |
null | null | null | 1.00e-101 | sap:Sulac_1786 |
| sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=28 to=247 evalue=2.0e-36 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:00169 | iprscan |
interpro
DB: HMMTigr |
null | null | null | 2.00e-36 | sap:Sulac_1786 |
| Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=11 to=103 evalue=2.6e-32 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma fact | iprscan |
interpro
DB: superfamily |
null | null | null | 2.60e-32 | sap:Sulac_1786 |
| no description (db=Gene3D db_id=G3DSA:1.10.601.10 from=6 to=99 evalue=6.6e-28) | iprscan |
interpro
DB: Gene3D |
null | null | null | 6.60e-28 | sap:Sulac_1786 |
| Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=105 to=181 evalue=2.3e-17 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Funct | iprscan |
interpro
DB: superfamily |
null | null | null | 2.30e-17 | sap:Sulac_1786 |
| (db=HMMPfam db_id=PF04542 from=33 to=100 evalue=4.8e-17 interpro_id=IPR007627 interpro_description=RNA polymerase sigma-70 region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 4.80e-17 | sap:Sulac_1786 |
| (db=HMMPfam db_id=PF04539 from=112 to=184 evalue=9.9e-17 interpro_id=IPR007624 interpro_description=RNA polymerase sigma-70 region 3 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 9.90e-17 | sap:Sulac_1786 |
| Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=164 to=249 evalue=8.1e-16 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Funct | iprscan |
interpro
DB: superfamily |
null | null | null | 8.10e-16 | sap:Sulac_1786 |
| (db=HMMPfam db_id=PF04545 from=197 to=244 evalue=1.1e-15 interpro_id=IPR007630 interpro_description=RNA polymerase sigma-70 region 4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: HMMPfam |
null | null | null | 1.10e-15 | sap:Sulac_1786 |
| SIGMA70FCT (db=FPrintScan db_id=PR00046 from=57 to=70 evalue=4.2e-13 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 4.20e-13 | sap:Sulac_1786 |
| SIGMA70FCT (db=FPrintScan db_id=PR00046 from=81 to=89 evalue=4.2e-13 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 4.20e-13 | sap:Sulac_1786 |
| SIGMA70FCT (db=FPrintScan db_id=PR00046 from=232 to=243 evalue=4.2e-13 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 4.20e-13 | sap:Sulac_1786 |
| SIGMA70FCT (db=FPrintScan db_id=PR00046 from=217 to=232 evalue=4.2e-13 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 4.20e-13 | sap:Sulac_1786 |
| SIGMA70FCT (db=FPrintScan db_id=PR00046 from=200 to=212 evalue=4.2e-13 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: sequence-specific DNA binding transcription factor activity (GO:0003700), Biological Process: transcription initiation, DNA-dependent (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) | iprscan |
interpro
DB: FPrintScan |
null | null | null | 4.20e-13 | sap:Sulac_1786 |
| no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=100 to=156 evalue=2.3e-12 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) | iprscan |
interpro
DB: Gene3D |
null | null | null | 2.30e-12 | sap:Sulac_1786 |
| no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=182 to=244 evalue=1.5e-06 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding) | iprscan |
interpro
DB: Gene3D |
null | null | null | 1.50e-06 | sap:Sulac_1786 |
| RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1051632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Sulfobacillus.;" source= |
UNIPROT
DB: UniProtKB |
74.6 | 240.0 | 368 | 6.40e-99 | F8I5B8_SULAT |