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SCNpilot_expt_1000_bf_scaffold_112_13

Organism: SCNPILOT_EXPT_1000_BF_Sphingobacteriales_43_110

near complete RP 53 / 55 MC: 2 BSCG 51 / 51 ASCG 14 / 38
Location: comp(17808..18581)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003792};; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG62 similarity UNIPROT
DB: UniProtKB
  • Identity: 46.6
  • Coverage: 249.0
  • Bit_score: 235
  • Evalue 8.50e-59
truA; tRNA pseudouridine synthase A; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 247.0
  • Bit_score: 233
  • Evalue 9.40e-59
tRNA pseudouridine synthase A n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRM5_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 46.2
  • Coverage: 247.0
  • Bit_score: 233
  • Evalue 3.00e-58

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Taxonomy

Flavihumibacter sp. ZG627 → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 774
ATGGCAAGATATTTCCTGGAAGTAATGTATGATGGCACAGCGTTCCACGGCTCTCAACTGCAGGGATCGCTACCTACAGTACAACTTGCAGTGAACGAAGGGCTCTCTACACTCTTCCGCACGGAAATGGAAACATTTGGCGCCAGCAGGACAGACGAAGGTGTACATGCGCTGTCCTCTTTCTATCACTTCGACACAGAATTGGAACCCTACCCTAACCTTTTATATAAACTAAATGCCATACTGCCTGGTGCGCTGACTGCAAAAGCATTGTATAGAGCAAATAATCCTGAACTGAATGCACGATTTGACGCTACCAGCAGGCAATACCGATATCGCATCTACAACAAGAAAAATCCATTTCTGCAAAAACGGGCATTGTACTACCCTTACAAAGTAAACCATGGACTACTGCATGAGATGGCAGCAATACTGAAAGAGTATCATGATTTTGAAAGTTTTTCGAAACGCAATACCCAAACGCATACTTTCAAATGCAATATTATGCAATCGCGCTGGGAAGAGCATGGTGAAGAATTGCATTATGTGGTAGAAGCCAACCGCTTTTTGCGTGGAATGGTGCGTGGTTTGGTAGCCACACAATTACATTTGTCAGGCGCGCATAAAGATGGCAATGATCTTAGAGCAATCCTGGAAGCTAAAGATTGCACGAAAGCTTATTTTAATGTGACCGGAAATGGCCTGTACCTGGAAAAGATAAATTATCCTGAAGGAGCACTTACGGAGATAACAGACAGCCTACCCACCAAATAG
PROTEIN sequence
Length: 258
MARYFLEVMYDGTAFHGSQLQGSLPTVQLAVNEGLSTLFRTEMETFGASRTDEGVHALSSFYHFDTELEPYPNLLYKLNAILPGALTAKALYRANNPELNARFDATSRQYRYRIYNKKNPFLQKRALYYPYKVNHGLLHEMAAILKEYHDFESFSKRNTQTHTFKCNIMQSRWEEHGEELHYVVEANRFLRGMVRGLVATQLHLSGAHKDGNDLRAILEAKDCTKAYFNVTGNGLYLEKINYPEGALTEITDSLPTK*