ggKbase home page

SCNpilot_expt_1000_bf_scaffold_28964_1

Organism: SCNPILOT_CONT_500_P_Rhizobiales_62_14

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 1 ASCG 12 / 38
Location: 3..1064

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CFCC04 related cluster n=1 Tax=unknown RepID=UPI0003CFCC04 similarity UNIREF
DB: UNIREF100
  • Identity: 91.1
  • Coverage: 337.0
  • Bit_score: 594
  • Evalue 9.20e-167
  • rbh
Bradyrhizobium elkanii strain UASWS1015 Contig172, whole genome shotgun sequence {ECO:0000313|EMBL:KIU49896.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.7
  • Coverage: 338.0
  • Bit_score: 598
  • Evalue 6.80e-168
P-type conjugative transfer ATPase TrbB; K03196 type IV secretion system protein VirB11 similarity KEGG
DB: KEGG
  • Identity: 86.9
  • Coverage: 343.0
  • Bit_score: 568
  • Evalue 1.30e-159
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bradyrhizobium elkanii → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1062
CGTCCGGGGAAGGACTGTCTCGACCCCGATGGAATCGGGGGTCATGTGGCGGCTTCACATCAACATGCGGAAGGTCTGGCGCGCGGCGCGCGAATGCTGCGCACGGCGCTTGGCCCGGCGATCGCCCGCTACCTCGACGACGCCAGCATCGTTGAAGTGATGCTCAACCCTGATGGGCGGCTCTGGATCGACCGCCTATCCGAGGGGCTGTCCGACACGGGCGAGCGGCTGTCAGCGGCGGACGGCGAGCGCATCGTCCGCCTGGTCGCCCACCACGTCGGCGCCGAGGTTCACGCGGGCGCGCCGCGCGTGTCGGCGGAGCTGCCCGAGACGGGAGAGCGGTTCGAGGGCCTGCTGCCGCCTGTCGTCGCCGCGCCGGCCTTCGCGATCCGCAAGCCCGCGGTCGCGGTGTTCACGCTCGACGATTATGTCCACGCCGGGATCATGTCGGCCGGACAGGCTGTGATGCTGCGCCAGGGCGTGGCGTCTCGCGCCAATATCCTCGTCGCCGGTGGCACATCCACCGGCAAGACCACGCTTACCAACGCTCTCCTCGCCGAGGTCGCGAAGACCGCCGATCGTGTCGTCATCATCGAGGATACGCGCGAGCTGCAATGCGCCGCGCCGAATCTCGTGGCGATGCGTACCAAAGACGGCGTCGCCTCGCTGTCCGATCTCGTGCGCTCGTCGCTGCGCCTGCGCCCCGATCGCATTCCGGTCGGCGAGGTGCGCGGAGCCGAGGCGCTGGAGCTGCTCAAGGCTTGGGGCACCGGACACCCCGGCGGCGTCGGCACGATCCACGCCGGCACCGCGATCGGTGCGCTGCGCCGGATGGAGCAGCTCATCCAGGAGGCCGTCGTCACTGTCCCGCGGGCGCTGATCGCCGAGACAATCGACATCGTCGCCGTCCTCTCCGGCCGCGGCTCTCTGCGCCGGCTTTCCGAACTCGCACGCGTCGAGGGCCTCGGCCCGGACGGGGACTATCGCATCGCGCCGGCCGTCATCGAGGGCGACGGCGACCCGGCCCTGCTCACCCCAAGCCCTGAAGGAGAAAGCCTGTGA
PROTEIN sequence
Length: 354
RPGKDCLDPDGIGGHVAASHQHAEGLARGARMLRTALGPAIARYLDDASIVEVMLNPDGRLWIDRLSEGLSDTGERLSAADGERIVRLVAHHVGAEVHAGAPRVSAELPETGERFEGLLPPVVAAPAFAIRKPAVAVFTLDDYVHAGIMSAGQAVMLRQGVASRANILVAGGTSTGKTTLTNALLAEVAKTADRVVIIEDTRELQCAAPNLVAMRTKDGVASLSDLVRSSLRLRPDRIPVGEVRGAEALELLKAWGTGHPGGVGTIHAGTAIGALRRMEQLIQEAVVTVPRALIAETIDIVAVLSGRGSLRRLSELARVEGLGPDGDYRIAPAVIEGDGDPALLTPSPEGESL*