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SCNpilot_expt_1000_bf_scaffold_452_18

Organism: SCNPILOT_EXPT_1000_BF_Kapabacteria_60_234

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 22161..22439

Top 3 Functional Annotations

Value Algorithm Source
RNP-1 like RNA-binding protein id=7719023 bin=BACIGN_2 species=Cardiobacterium hominis genus=Cardiobacterium taxon_order=Cardiobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=BACIGN_2 organism_group=Unknown_CP similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 93.0
  • Bit_score: 189
  • Evalue 1.80e-45
RNP-1 like RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 58.1
  • Coverage: 93.0
  • Bit_score: 114
  • Evalue 1.40e-23
RNP-1 like RNA-binding protein {ECO:0000313|EMBL:ABP36905.1}; TaxID=290318 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Prosthecochloris vibrioformis (strain DSM 265) (Chlorobium vibrioforme; subsp. thiosulfatophilum (strain DSM 265)) (Chlorobium phaeovibrioides; (strain DSM 265)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.1
  • Coverage: 93.0
  • Bit_score: 114
  • Evalue 6.00e-23

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Taxonomy

Chlorobium phaeovibrioides → Chlorobium → Chlorobiales → Chlorobia → Chlorobi → Bacteria

Sequences

DNA sequence
Length: 279
ATGAATATCTATGTTGGAAACCTGCCGTATTCCATGGGTGACGTTGAATTGCGTCAAGTCTTCGAGGAATTCGGCGCCGTCGATTCGGCTTCGGTAGTGAAGGACAAGTTCACTGGCCGCTCGCGTGGTTTCGGTTTTGTCGAGATGTCCGATGGTGACGCCGCAAATCGCGCCATCGACGCTCTCAACGGCCGCAACATCGGCGGTCGCCCTCTGGTTGCCAATGAAGCACGTCCGCGTGATGAGCGCCCGCGCTTCAACAACCGCGATCGCTATTGA
PROTEIN sequence
Length: 93
MNIYVGNLPYSMGDVELRQVFEEFGAVDSASVVKDKFTGRSRGFGFVEMSDGDAANRAIDALNGRNIGGRPLVANEARPRDERPRFNNRDRY*