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SCNpilot_expt_1000_bf_scaffold_109_6

Organism: SCNPILOT_CONT_300_BF_Novosphingobium_63_714

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: 6086..7498

Top 3 Functional Annotations

Value Algorithm Source
ISPsy6 transposase n=5 Tax=Pseudomonas aeruginosa RepID=K1BDY6_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 66.5
  • Coverage: 460.0
  • Bit_score: 633
  • Evalue 1.80e-178
  • rbh
Transposase {ECO:0000313|EMBL:EJM11726.1}; TaxID=1144325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM21.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.5
  • Coverage: 460.0
  • Bit_score: 633
  • Evalue 3.30e-178
transposase IS4 similarity KEGG
DB: KEGG
  • Identity: 63.0
  • Coverage: 460.0
  • Bit_score: 618
  • Evalue 2.50e-174

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Taxonomy

Pseudomonas sp. GM21 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1413
ATGGGCCGTTTCGTCCAGGCAGAAGACCGTCGGCAGGACTATCTTCTGCCACCATCGCTCGATGATTATGTGTCGGCGGACAACCCGGTTCGGGCAGTCGAGGCGTTCATCGATGCGCTGGATCTGAAGGCGCTGGAGTTCGCGGGCGTGACGCCGGCTGAGACAGGCCGTCCCGCCTATCATCCAGCGACGATGCTCAAAATCTATCTCTATGGCTATTTGAATCGGGTCCAGTCGAGCCGGCGGCTCGAGCGGGAAGCACAGCGCAACGTCGAATTAATGTGGCTGACGGGGCGGTTGGCGCCCAACTTCAAGACGATCGCCAACTTCCGCCAGACCAATGGCGCTGCGATCCGGTCTGTGTGCAGCCAGTTCATCGTCTTGTGCCGGCAATTGGGGCTGTTCACGCGGGCGGTCGTCGCGATCGATGGTAGCAAGATGAAGGCGGTCAACAACCGCGACAAGAACTACACGGCCGCGAAGGTAGCCTCGCGGATGAAGCAGGTGCAGGACAATATCAATCGGTATCTCGACGCGCTTGATCGTGCCGATCGCGACGAAAGCGACATTGCCGAGCCAAAGGCGAAGCGATTGACGGAGAAGATCGCCCGGCTGCGCGCACAGATGCGGGAGCTTGCCGCTCGTGAAGAGGAAGTTCGCAATGCGCCGGACCAGCAGGTGTCGCTGACGGATCCCGACGCACGTGCAATGACGAGCGCGGGTCGCGGCACGAGCATCGTCGGCTACAATCTGCAGGCAGCGGTTGATGCCGAGCATCATCTCATTGTTGCGCACGAGCTTTTGAATGTCGGGAATGACCGGGGACAGCTTTCTGTCATGGCGGCGAAAGCCAAGGATGCCATGGGCGTCGAGGCCTTGGATGCCATCGCCGACAAAGGCTACTTCAAAGGCGAGGATATCCGGACCTGCGAGGACATAGGCGTGACCGCCTTCGTGCCCAGGCCGCTGACCTCAGGGGCAAAGGCGCAAGGCCGCTTTGGCAAACCGGACTTCGTCTATCTGGAGCAGGAAAATGTCTATCGGTGCCCCGCGGGCGAAGATCTGATCTATCGTTATACCTCGGTCGAGGACGGCATGACGCTCCATAGCTACTGGAGCTCGAATTGCCAGACCTGCGCACTTCATGACCAATGCACGACCGGTAAGGAACGACGGGTCAGAAGATGGGAGCATGAAGCAGTCGTCGAGGCGATGGAGCGGCGCCTCGATCGTGCGCCAAAGGCGATGCGGATCCGCCGACAGACTGTTGAGCATCCCTTCGGCACACTGAAAGCCTGGATGGGCTCGACACATTTCCAAATGAAAACGCTCAAGCATGTCAGAACGGAGGCCAGCCTCCATATTCTGGCATATAACTTAGGCTGGTCGCCATCCTGGGCGTCCGGGCGATGA
PROTEIN sequence
Length: 471
MGRFVQAEDRRQDYLLPPSLDDYVSADNPVRAVEAFIDALDLKALEFAGVTPAETGRPAYHPATMLKIYLYGYLNRVQSSRRLEREAQRNVELMWLTGRLAPNFKTIANFRQTNGAAIRSVCSQFIVLCRQLGLFTRAVVAIDGSKMKAVNNRDKNYTAAKVASRMKQVQDNINRYLDALDRADRDESDIAEPKAKRLTEKIARLRAQMRELAAREEEVRNAPDQQVSLTDPDARAMTSAGRGTSIVGYNLQAAVDAEHHLIVAHELLNVGNDRGQLSVMAAKAKDAMGVEALDAIADKGYFKGEDIRTCEDIGVTAFVPRPLTSGAKAQGRFGKPDFVYLEQENVYRCPAGEDLIYRYTSVEDGMTLHSYWSSNCQTCALHDQCTTGKERRVRRWEHEAVVEAMERRLDRAPKAMRIRRQTVEHPFGTLKAWMGSTHFQMKTLKHVRTEASLHILAYNLGWSPSWASGR*