ggKbase home page

SCNpilot_expt_1000_bf_scaffold_109_17

Organism: SCNPILOT_CONT_300_BF_Novosphingobium_63_714

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: comp(21313..22245)

Top 3 Functional Annotations

Value Algorithm Source
Probable 5-dehydro-4-deoxyglucarate dehydratase {ECO:0000256|HAMAP-Rule:MF_00694}; EC=4.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00694};; 5-keto-4-deoxy-glucarate dehydratase {ECO:0000256|HAMAP-Rule:MF_00694}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.9
  • Coverage: 309.0
  • Bit_score: 493
  • Evalue 2.70e-136
5-dehydro-4-deoxyglucarate dehydratase; K01707 5-dehydro-4-deoxyglucarate dehydratase [EC:4.2.1.41] similarity KEGG
DB: KEGG
  • Identity: 69.9
  • Coverage: 309.0
  • Bit_score: 440
  • Evalue 4.70e-121
Probable 5-dehydro-4-deoxyglucarate dehydratase n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MT20_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 79.9
  • Coverage: 309.0
  • Bit_score: 493
  • Evalue 1.90e-136
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobium japonicum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 933
ATGTTCGATCCCGTCTCGATGGCGCAGCGGCTGGGCGAGGGCCTGCTGTCCTTTCCGGTCACTCACTTCGACGCCGATGGCGCGTTTGATGAAGGCCCCTTCCGCGCCCATTGCGCATGGATGCTCGAACATGAGCTGTCGGGCCTGTTTGCGGCCGGCGGCACGGGCGAGTTCTTCTCCCTCACCCCCGACGAGGTCGCCCATGTCGTGCGCGCCGCCGTGGGCGAGCGTAAGGCCGATGTCCCGGTGATCTCGGGCTGCGGCTATGGCACGGCGATTGCGGTGGACATTGCGCGCAAGGCCGAGGCCGCAGGGGCCGATGGCATCCTGCTGCTGCCGCCTTATCTGATGGGGGGCAAGCAGGAAGGGTTGGCAGCCCATATCGAGGCGGTGTGCCGCGCAACGGGGCTGGGCGTCATCGTCTATAATCGCGGCAATGCGATTGTGGATGATGAAACGCTGGCGGGTCTGTGCGAACGCAACGCCAATCTGGTGGGCTATAAGGATGGCGTGGGCGATATCGAGCTGATGGCGCGCATCTATGCGCGCATGGGCGACCGGCTGACCTATATCGGCGGGCTGCCCACGGCGGAAACCTTTGCCACGCCCTATCTGACCATGGGCGTGACCACCTATTCCTCGGCCATTTTCAACTTCATGCCGCAATGGGCGCTGGAATTTTACAACGCGGTGCGCAGCGGTAACCACGCCCATGTGCAGCAGCAATTGCGCGATTTCGTGCTGCCCTATATCAACCTGCGCAATCAGGGGCGCGGCTATGCGGTGTCGATCGTCAAGGCCGGTTGCCGGGTGATCGGGCGCGATGCAGGCCCCGTGCGCAGCCCGCTGACCGATCTGTCGGCGGTCGAGGATGCGCAATTGGCCGCGCTCATTGAAAAAGTCGCGCCTTATTCTCTCCCGCTTCCTGCCTGA
PROTEIN sequence
Length: 311
MFDPVSMAQRLGEGLLSFPVTHFDADGAFDEGPFRAHCAWMLEHELSGLFAAGGTGEFFSLTPDEVAHVVRAAVGERKADVPVISGCGYGTAIAVDIARKAEAAGADGILLLPPYLMGGKQEGLAAHIEAVCRATGLGVIVYNRGNAIVDDETLAGLCERNANLVGYKDGVGDIELMARIYARMGDRLTYIGGLPTAETFATPYLTMGVTTYSSAIFNFMPQWALEFYNAVRSGNHAHVQQQLRDFVLPYINLRNQGRGYAVSIVKAGCRVIGRDAGPVRSPLTDLSAVEDAQLAALIEKVAPYSLPLPA*