ggKbase home page

SCNpilot_expt_1000_bf_scaffold_119_18

Organism: SCNPILOT_CONT_300_BF_Novosphingobium_63_714

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: 28225..30006

Top 3 Functional Annotations

Value Algorithm Source
UPI0003D5F14D related cluster n=1 Tax=unknown RepID=UPI0003D5F14D similarity UNIREF
DB: UNIREF100
  • Identity: 73.7
  • Coverage: 593.0
  • Bit_score: 907
  • Evalue 8.20e-261
  • rbh
Alpha-amylase {ECO:0000313|EMBL:ETI63183.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.7
  • Coverage: 593.0
  • Bit_score: 907
  • Evalue 1.20e-260
alpha amylase similarity KEGG
DB: KEGG
  • Identity: 70.7
  • Coverage: 594.0
  • Bit_score: 855
  • Evalue 8.90e-246
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobium sp. C100 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1782
ATGGCTCTGGCCGCGCTGGCGGCGTCCGCCGCGCAAGGCACGCCCCTGTCCGACCTGCGCGCTCGCACGCCGGAACAGGAAGTGATCTATTTCGTGCTGCCCGACCGTTTTGCCAATGGCGATCCGGCCAATGATACGGGCGGCATCGCGGGCGATCGGCTGACCCATGGGTTCGACCCTGCGGACAAGGGCTTCTATCATGGCGGCGACCTCAAAGGGCTGACCGCGCGGCTTGATTATATTCAGGGGCTGGGCGCCAGCGCGATCTGGGTCGGACCGATTTTCAGGAACAAGCCGGTGCAGGGGGCCAAGGGCCATGAAAGCGCGGGTTATCACGGCTATTGGATCACCGATTTCCTGCATGTCGATCCGCATTTCGGCAGCGATGCCGATTTCGCCGCGCTGGTAGAGGCGGCCCATGCGCGGGGGATGAAGGTCTATATGGACATCATCGTCAACCACACCGCCGATGTCATCCAATACCGCGAGGCGGGCGATGCCGCCGCGCCCTATCGTTCGAAGGCCGATTATCCCTTTTCGCGCCGGGGCGGGGTTGCGGGCGCGCCGATCAATGCTGGGTTTGCGGGCGATGATGATGCGCGCCCCGCCAACTGGGTGCATATGACCGATCCGGGTTTTGCCTATACGCCTTATGTGCCGCGCGGCGAGGAGAGGGTGAAGAACCCGGCCTGGCTCAACAATCCCATCTGGTATCACAATCGCGGCGACACCGACTGGAAGGGCGAGAGCGCGCAATATGGCGATTTCGTCGGGCTGGACGATCTGGCCACGGAAAACCCGCGCGTGGTCAAAGGGTTCATCGAGATCTACGGCAGCTGGATCGACCGTTTCGGCATTGACGGCTATCGGATCGACACGGCCAAGCATGTGAACCCGCAATTCTGGCGCGCCTTTGTCCCCGCCATACAGGCGCGGGCGCGGGCGCGCGGCATCCCCAATTTCCACATCTTTGGCGAGGTGGCGACGGGCGATTATGATCCGGCGCTGCTGGCCGGATGGGTGTATCGCGCGGGCCTGCCTGCGGTGCTGGATTTTGCCTTCATGCGCGCGGCCACCGATGCGGCAAGCGGCAGGACCGGCACGCAGGAACTGGCCCGCATGGTCGATGACGATGCGCTCTATGGGCCAAGGGGCGCGCTGCGCCTGCCCACTTTCCTTGGCAATCACGACAATGGCCGTTTCGCCATGGCCCTGCGTGAGGCCAGGCCGGGGATTGGCGCGCAGGAATGGCTGGCGCGCGACCTGCTGGGCCATGCGATGCTGCTGACGCTGCGCGGCGTGCCGACCATCTATTATGGCGATGAACAGGGATTTGCCGGGCGCGGGGGCGATCAATCCTCGCGTCAGGATATGTTCGCCAGCAAGGTGGCGGAATATAATCAGGATGTGCTGGTGGGCACCGCCTCCACCACCGCCGCCGCCAATTTCACGCCCGGCCACCCGCTGTATCAGGCCATCGCCCGCCTTGCGCAGATCCGCCAGTCTACCCCGGCGCTCTGGGGCGGGCGGACGATCCTGCGCGCCTCGGGCGAGGGGCCGGGCCTATTTGCCGTCTCGCGCCTCGATCCCAAGACCGGGGCCGAGGTGCTGCTGGCCTTCAACACCTCCGACCGACCCATCACCGCGCAGGTTTCCGTCGCGGCCGCCACCGGGCGCTTTAACGCCCTGTCCGGCCCATGCCCCGCCGCGCCCGCCGCACCGGGCAGCGCGACCATCAGCCTGCCCGCTTTCGGCTATGCCATCTGCGCCGCCACCCAGTAA
PROTEIN sequence
Length: 594
MALAALAASAAQGTPLSDLRARTPEQEVIYFVLPDRFANGDPANDTGGIAGDRLTHGFDPADKGFYHGGDLKGLTARLDYIQGLGASAIWVGPIFRNKPVQGAKGHESAGYHGYWITDFLHVDPHFGSDADFAALVEAAHARGMKVYMDIIVNHTADVIQYREAGDAAAPYRSKADYPFSRRGGVAGAPINAGFAGDDDARPANWVHMTDPGFAYTPYVPRGEERVKNPAWLNNPIWYHNRGDTDWKGESAQYGDFVGLDDLATENPRVVKGFIEIYGSWIDRFGIDGYRIDTAKHVNPQFWRAFVPAIQARARARGIPNFHIFGEVATGDYDPALLAGWVYRAGLPAVLDFAFMRAATDAASGRTGTQELARMVDDDALYGPRGALRLPTFLGNHDNGRFAMALREARPGIGAQEWLARDLLGHAMLLTLRGVPTIYYGDEQGFAGRGGDQSSRQDMFASKVAEYNQDVLVGTASTTAAANFTPGHPLYQAIARLAQIRQSTPALWGGRTILRASGEGPGLFAVSRLDPKTGAEVLLAFNTSDRPITAQVSVAAATGRFNALSGPCPAAPAAPGSATISLPAFGYAICAATQ*