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SCNpilot_expt_1000_bf_scaffold_165_24

Organism: SCNPILOT_EXPT_300_BF_Sphingobacteriia_47_13

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 11 / 38
Location: 29794..30504

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, LytTR family n=1 Tax=Niabella soli DSM 19437 RepID=H1NV03_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 59.9
  • Coverage: 232.0
  • Bit_score: 285
  • Evalue 6.10e-74
Transcriptional regulator {ECO:0000313|EMBL:AHF16289.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.3
  • Coverage: 229.0
  • Bit_score: 284
  • Evalue 1.10e-73
LytTR family two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 48.7
  • Coverage: 228.0
  • Bit_score: 229
  • Evalue 9.60e-58

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Taxonomy

Niabella soli → Niabella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 711
ATGAAAGAAGACCTACCTCCACAATGCCTCATCGTAGACGACAACCGCGTTGCACGTCTCATGCTCCGCCAGTTCCTGGAAAAGATCGCAGTGGTGCAGATCGCCGGTGAATGTGAAGACGCTATCTCCGCGCGTAAAGTATTGCAGGAGAAACCGGTCGACATACTTTTCCTCGACATCGAGATGCCGGGAATGAGCGGTCTCGAATTACTCAAAGTTTTACCTGAAAAACCACTCACCATTCTTACTACGGCCAAGCAGGGTTACGCAGTGGAAGCTTTTGAACTGAACGTGGTCGATTACCTCGTAAAGCCTTTTTCTTTTTCCCGTTTGATATTGGCTGTGGAACGCGCAGTGGAATTGTTGCGCGGCAAAGACACCCAACTCAGCCAGATATCTCCCGATTTTCTTTTTATCAAGGAAAGAAAAGTAATCCGCAAACTCGACCTCAACGACATTTTATGGATGGAAGCAAAAGGGGACTACGCCCGCGTGCACGTACCCGGCAAAAGCTATATCATTCATTCAAGCCTGCGCCTGCTGGAAGAACGTTTGCCAAGCCCGCGTTTCATTCGCGTACACCGCAGCTATATCATTGCACTCGATAAGATCGATTATATCGAAGACATGGTCGTGCATATTCACGATGTGGCCATTCCTGTGTCCGAATCATACCGCGATCAATTATTACAAAACCTTCATTTGCTGTAA
PROTEIN sequence
Length: 237
MKEDLPPQCLIVDDNRVARLMLRQFLEKIAVVQIAGECEDAISARKVLQEKPVDILFLDIEMPGMSGLELLKVLPEKPLTILTTAKQGYAVEAFELNVVDYLVKPFSFSRLILAVERAVELLRGKDTQLSQISPDFLFIKERKVIRKLDLNDILWMEAKGDYARVHVPGKSYIIHSSLRLLEERLPSPRFIRVHRSYIIALDKIDYIEDMVVHIHDVAIPVSESYRDQLLQNLHLL*