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SCNpilot_expt_1000_bf_scaffold_54895_1

Organism: SCNPILOT_EXPT_300_BF_Sphingobacteriia_47_13

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 ASCG 11 / 38
Location: 2..640

Top 3 Functional Annotations

Value Algorithm Source
Heavy metal efflux pump, CzcA family n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y2P1_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 87.5
  • Coverage: 160.0
  • Bit_score: 284
  • Evalue 7.20e-74
CzcA family heavy metal efflux pump; K07787 Cu(I)/Ag(I) efflux system membrane protein CusA similarity KEGG
DB: KEGG
  • Identity: 87.5
  • Coverage: 160.0
  • Bit_score: 284
  • Evalue 2.30e-74
Heavy metal efflux pump, CzcA family {ECO:0000313|EMBL:ACU05251.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.5
  • Coverage: 160.0
  • Bit_score: 284
  • Evalue 1.00e-73

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Taxonomy

Pedobacter heparinus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 639
GCAATAGAAAAGCTCAATCAGCAAAAAGGCATTTTACCGGCAGGCTATTTTCTGGAATGGAGCGGGCAGTATGAAAGTCTGATCAGGGGACAGCAAACGCTGATGTGGATCGCGCCCATTGTGCTGGTGATTATCTTCTTCTCCCTGTACTTTGCCTTTCACTCCATCCGTGAAGCGTTTTTAAGCCTGATCACCGTTCCGTTTGCATTGATCGGCGGAGCCTATATCATCTATTTCTGGGGCGTCAACCTTTCAGTAGCGGTTGCCGTGGGCTTTATCGCCTTATTTGGCATTGCGGTGGAAACCGGTATCGTCATGGTGATCTACCTCAACGATGCCATGCATCAATTGATCAAACGCAAAGGCAATTCCAGCGAAGCCATTACCAGAGAAGATCTGCGGGAGTATGTCATTCAGGGTGCCGCCAAAAGGCTGCGTCCAAAGATCATGACGGTTTGTGTTTCGCTGTCCGGTGCTGTGGGCCACCGGCGTGGGAACCGATGTGATGAAACCGGTAGTGCTGCCAATGATTGGCGGTGTGTTTACTTCAGCCATTCACATCCTGCTGGTAACGCCGCTCATCTTCTTAATGGCAAAAGAGTACGAATTAAAAAAATACGGAAAACTGGAGGTATATGA
PROTEIN sequence
Length: 213
AIEKLNQQKGILPAGYFLEWSGQYESLIRGQQTLMWIAPIVLVIIFFSLYFAFHSIREAFLSLITVPFALIGGAYIIYFWGVNLSVAVAVGFIALFGIAVETGIVMVIYLNDAMHQLIKRKGNSSEAITREDLREYVIQGAAKRLRPKIMTVCVSLSGAVGHRRGNRCDETGSAANDWRCVYFSHSHPAGNAAHLLNGKRVRIKKIRKTGGI*