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SCNpilot_expt_1000_bf_scaffold_54_5

Organism: SCNPILOT_EXPT_1000_BF_Xanthomonadales_66_270

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(3723..4433)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.3
  • Coverage: 239.0
  • Bit_score: 361
  • Evalue 7.20e-97
pseudouridine synthase; K06182 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] similarity KEGG
DB: KEGG
  • Identity: 74.7
  • Coverage: 237.0
  • Bit_score: 348
  • Evalue 1.80e-93
RNA pseudouridine synthase n=1 Tax=Dyella japonica RepID=UPI000306E034 similarity UNIREF
DB: UNIREF100
  • Identity: 75.3
  • Coverage: 239.0
  • Bit_score: 361
  • Evalue 5.10e-97

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Taxonomy

Dyella japonica → Dyella → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 711
ATGCGCCTCAACAAGTACATCAGCGACACCGGCCTTTGCTCGCGGCGCGAAGCCGACGAACTCATCGAAAGCGGCCGGGTCACGGTCGACGGCCGCAAGGCCGCCGTCGGCGCGGTCGTCGAGGCCGGTGCGGAGGTGCTGGTCGACGGCAGTCCGCTCAAGCTCAAGAACCAGCGCGGCGGCGCCAAGTCGGTCTACATCGCACTGAACAAGCCAGTCGGCATCACCTGCACGACCGAGTCCGGCGTGAAGGACAACATCATCGACTTCGTCGACCACCGCGAGCGCATTTTCCCGATCGGCCGGCTCGACAAGGATTCCGAAGGGCTGATCCTGCTGACCAACAACGGCGACATCGTCAACGAGATCCTGCGCTCGGAGAATCGCCACGAGAAGGAATATCTCGTCGCCGTCAGCAAGCCGGTGACCGAGGAGTTTCTCAGCGGCATGGCCCGCGGCGTCCGCATCCACGGCCAGATGACCAAGCCGTGCAAGGTCTATAAATTGGGGAAATTTGGATTCCGCATCATCCTCACGCAGGGGCTGAACCGGCAGATCCGCCTGATGGCGGCGGAATTCGGCTACCGCGTGAAGCAACTGCGGCGCGTACGTATCGTCAACATCCGGCTCGGCAATCTGAAGCTGGGCCAATGGCGCAACCTGACACCGGCGGAACTGCGCGGCCTGCTGCCGCAGCGGACTCAGTGGTAG
PROTEIN sequence
Length: 237
MRLNKYISDTGLCSRREADELIESGRVTVDGRKAAVGAVVEAGAEVLVDGSPLKLKNQRGGAKSVYIALNKPVGITCTTESGVKDNIIDFVDHRERIFPIGRLDKDSEGLILLTNNGDIVNEILRSENRHEKEYLVAVSKPVTEEFLSGMARGVRIHGQMTKPCKVYKLGKFGFRIILTQGLNRQIRLMAAEFGYRVKQLRRVRIVNIRLGNLKLGQWRNLTPAELRGLLPQRTQW*