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SCNpilot_expt_1000_bf_scaffold_16_17

Organism: SCNPILOT_EXPT_1000_BF_Xanthomonadales_66_270

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(24183..25739)

Top 3 Functional Annotations

Value Algorithm Source
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.0
  • Coverage: 516.0
  • Bit_score: 826
  • Evalue 2.30e-236
Lysine--tRNA ligase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VSQ3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 80.0
  • Coverage: 516.0
  • Bit_score: 826
  • Evalue 1.60e-236
lysyl-tRNA synthetase (class II) similarity KEGG
DB: KEGG
  • Identity: 79.8
  • Coverage: 511.0
  • Bit_score: 815
  • Evalue 1.20e-233

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Taxonomy

Rhodanobacter fulvus → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1557
ATGAACAGCGAAACCACGGGCATGCCGTCGGCGGCAGACAGCAACCTCGACACGGCCGTTGCCGTCGACGAGAACCGGCTCATCGCCGAACGCCGCGAGAAACTGCGCGCCCTGCGTGCGGCCGGCATCGCGTTTCCGAACGATTTCGTGCCCGATGCGTTCGCCGGCGATCTGCAGGCCGAGTTCGCCGACAAGGACCAGTGGACCGCCGAAGCCATCGAGGCGCTGGGGCGCCGCGTGCGCGTGGCCGGCCGTCTGCTGGCCAAGCGCCAGATGGGCAAGGCCAGCTTCGCCCAGGTGCAGGACATGTCGGCACGGCTGCAGCTGTTCCTGCAGCAGGCCGCACTGGGCGAGGATGCCTATGCGGCGTTCAAGGGCTGGGACGTCGGCGACATCATCGGCGCCGAAGGCGTGCTGACCCGCACGAAGACCGGCGAGCTGTCGGTCAAGGTGGACAGGCTGCGCCTGCTGACCAAGTCGCTGCGTCCGCTGCCGGACAAGTGGCACGGCCTGGCCGACGTCGAGCAGCGCTATCGCCAGCGCTACGTCGACCTCGTCGTGACCGAGGAAGCGCGCCGCGTGTTCAAGCTGCGCTCGGCCGTGATCGGCCGCATCCGCCAGTGGCTCGAAGATCCGTCGCGCCGCTTCATGGAAGTCGAGACGCCGATGATGCACGTGATCCCGGGCGGCGCGACCGCGCGGCCGTTCGTGACCCATCACAACGCGCTCGACCTGCAGCTGTATCTGCGCGTCGCGCCGGAGCTGTATCTCAAGCGCCTCGTCGTCGGCGGCTTCGACCGCGTCTACGAGATCAACCGCAACTTCCGCAACGAGGGCGTGTCCACGCGGCACAACCCCGAATTCACGATGCTGGAGCTGTACCAGGCCTACGCGACCTACAACGAGATCATGGACCTGACCGAGGCGCTGATCCGCGATGTGGCGCAGGCCACGCTCGGCACGACCGCGCTGACCTGGGAAGGCCGTGCGATCGACGTCGGCCCGGCGTTCAGGCGCTGGCCGATGGAGCAGGCCGTGCGCGAACTCAACCCCGAGATTCCGGCGCAGGATCTGCGCGACCGCGACGCGCTCGCCGCGCATTGCGCGCGCAAGGGCATCCACGTCAAGCCGTCCTACGGCTGGGGCAAGCTGCTGCTGGAACTGTTCGAGGCCACGGTCGAGCCGACCCTGGTGCAGCCGACCTTCATCACGCAGTACCCGACCGAGGTCTCGCCGCTGGCGCGCGAGAACGACGCCGATCCGGGCATCACCGACCGTTTCGAGCTGTTCATCGGCGGCAAGGAAATCGCGAACGGTTTTTCCGAGCTCAACGATCCGGAGGACCAGGCTGCGCGCTTCCAGGCCCAGGTCGCGGCCAAGGACTCGGGCGACGACGAAGCCATGCATTTCGACCACGACTACATCCGCGCGCTCGAATACGGCCTGCCGCCGACCGGCGGTCTCGGCATCGGCATCGACCGGCTCGTGATGCTGCTGGCCGATGCGGCCTCGATCCGCGACGTGCTGCTGTTTCCGTACATGCGTCCCGAAGCCTGA
PROTEIN sequence
Length: 519
MNSETTGMPSAADSNLDTAVAVDENRLIAERREKLRALRAAGIAFPNDFVPDAFAGDLQAEFADKDQWTAEAIEALGRRVRVAGRLLAKRQMGKASFAQVQDMSARLQLFLQQAALGEDAYAAFKGWDVGDIIGAEGVLTRTKTGELSVKVDRLRLLTKSLRPLPDKWHGLADVEQRYRQRYVDLVVTEEARRVFKLRSAVIGRIRQWLEDPSRRFMEVETPMMHVIPGGATARPFVTHHNALDLQLYLRVAPELYLKRLVVGGFDRVYEINRNFRNEGVSTRHNPEFTMLELYQAYATYNEIMDLTEALIRDVAQATLGTTALTWEGRAIDVGPAFRRWPMEQAVRELNPEIPAQDLRDRDALAAHCARKGIHVKPSYGWGKLLLELFEATVEPTLVQPTFITQYPTEVSPLARENDADPGITDRFELFIGGKEIANGFSELNDPEDQAARFQAQVAAKDSGDDEAMHFDHDYIRALEYGLPPTGGLGIGIDRLVMLLADAASIRDVLLFPYMRPEA*