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SCNpilot_expt_1000_bf_scaffold_246_20

Organism: SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 20953..22854

Top 3 Functional Annotations

Value Algorithm Source
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.7
  • Coverage: 583.0
  • Bit_score: 1090
  • Evalue 0.0
Elongation factor 4 n=1 Tax=Sphingobium sp. SYK-6 RepID=G2INR0_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 93.7
  • Coverage: 583.0
  • Bit_score: 1090
  • Evalue 0.0
  • rbh
lepA; GTP-binding protein LepA; K03596 GTP-binding protein LepA similarity KEGG
DB: KEGG
  • Identity: 93.7
  • Coverage: 583.0
  • Bit_score: 1090
  • Evalue 0.0
  • rbh

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Taxonomy

Sphingobium sp. SYK-6 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1902
ATGACAGACCTCGCCCATATCCGGAACTTCTCGATCATCGCGCATATCGACCACGGCAAGTCGACGCTCGCGGACCGTCTGATCCAACGGACGGGCGGCCTGAGCGAGCGCGAGATGTCCGCACAAGTCCTTGATAATATGGATATCGAGAAAGAACGCGGAATCACCATCAAAGCGCAAACCGTGCGCCTCGACTATACCGCGCAAGACGGCGTCACCTATGAGCTGAACCTCATGGACACGCCGGGTCATGTCGACTTCGCCTATGAGGTCAGCCGTAGCCTCGCCGCGTGCGAGGGCGCGCTCCTGGTGGTGGACGCCGCGCAGGGGGTGGAAGCGCAGACACTCGCCAACGTCTATCAGAGCATCGAGCACGACCATGAGATCGTCCCGGTCATCAACAAGATCGACCTGCCCGCCGCCGAGCCGGAGAAAGTGAAGGCCGAGATCGAGGACGTGATCGGTCTCGACGCCAGCGACGCGGTGCTTGCCAGCGCCAAGGCCGGCATCGGCATCGACGAGATTCTTGAAGCCATTGTCGCGCGCATCCCGCCGCCCAAGGGCAACCGCGACGCGCCACTGGAAGCGATGCTGGTCGATAGCTGGTACGACCCCTATCTCGGCGTCGTCATCCTCGTACGCGTCATCAACGGCGTATTGAAAAAAGGTCAGCAGATCAAGTTCATGATCGGCGGCACCGAGCATCTGATCGACCGTGTCGGCTGCTTCCGCCCCAAGATCGAGCAGCTTGCCGAACTGGGGCCGGGCGAGATCGGCTTCATCACCGCGCAGATCAAGGACATCACCGAGACCCGCGTGGGCGACACCATCACCACGGTAAAGAACGGCGCGGCCAAGCCGCTGCCCGGCTTCAAGGAAGTGCAGCCGGTGGTATTCTGCGGCTTGTTCCCGGTCGACGCCGCCGATTTCGAGAAGCTGCGCGACAGCATCGCCAAGCTGCGCCTCAACGACGCCAGCTTCAGCTTCGAGATGGAGACGAGCGCAGCGCTGGGCTTCGGTTTCCGCTGCGGGTTCCTCGGCCTGCTCCACCTGGAGATCATCCAGGAGCGGCTGACCCGCGAATATGATCTGGACCTCATCACCACCGCGCCGAGTGTGGTCTACGACATCCACATGACCGACGGGAGCATGATCCAACTCCACAACCCGGCCGACATGCCCGATCCGGTTAAAATCGACTATATCGAGGAGCCGTGGATCGAGGCGACCATCTATGTGCCGGACGAATATCTCGGCGCGATCCTCAAGCTGTGCCAGGACCGGCGCGGTATCCAGAAAAACCTCACTTATGTGGGCGGCCGCGCGCAAGTGACCTACGAGCTGCCGCTGAACGAAGTGGTGTTCGACTTCTACGATCGGTTGAAGTCGATTTCACGCGGCTATGCCAGCTTCGATTATCACCAGATCGGCACGCGCGAGGGTGATCTGGTCAAGATGAACATCCTCGTGAACAACGAACCGGTGGACGCGCTCTCCATGATCGTCCACCGCGGCGCGGCCGAGGCGCGCGGGCGGCACATGTGCGAGCGCCTCAAGGACCTTATCCCGCGTCACCTGTTCAAAATCCCTATCCAGGCCGCCATCGGCGCCAAGGTCATCGCCCGCGAGACCATCGCCGCGCTGCGCAAGGATGTGACCGCCAAATGCTATGGCGGCGACATCACCCGCAAGAAGAAGCTGCTGGAGAAGCAGAAAGAGGGCAAGAAGCGGATGCGCGAATATGGCAAGCGTTCATTGCGGCACTACGTATGGGGGATGAGGGATAAGGCCGGGAATCGCCGCCTCCCTTCTCCATCCCGCCCGGGAAGCGGATCACGCGAATGTCCCGCCCATCGGGTTGAACGCCGTCTTCGGGGTAATGGCTGGAGTTCGTCTGCGTGA
PROTEIN sequence
Length: 634
MTDLAHIRNFSIIAHIDHGKSTLADRLIQRTGGLSEREMSAQVLDNMDIEKERGITIKAQTVRLDYTAQDGVTYELNLMDTPGHVDFAYEVSRSLAACEGALLVVDAAQGVEAQTLANVYQSIEHDHEIVPVINKIDLPAAEPEKVKAEIEDVIGLDASDAVLASAKAGIGIDEILEAIVARIPPPKGNRDAPLEAMLVDSWYDPYLGVVILVRVINGVLKKGQQIKFMIGGTEHLIDRVGCFRPKIEQLAELGPGEIGFITAQIKDITETRVGDTITTVKNGAAKPLPGFKEVQPVVFCGLFPVDAADFEKLRDSIAKLRLNDASFSFEMETSAALGFGFRCGFLGLLHLEIIQERLTREYDLDLITTAPSVVYDIHMTDGSMIQLHNPADMPDPVKIDYIEEPWIEATIYVPDEYLGAILKLCQDRRGIQKNLTYVGGRAQVTYELPLNEVVFDFYDRLKSISRGYASFDYHQIGTREGDLVKMNILVNNEPVDALSMIVHRGAAEARGRHMCERLKDLIPRHLFKIPIQAAIGAKVIARETIAALRKDVTAKCYGGDITRKKKLLEKQKEGKKRMREYGKRSLRHYVWGMRDKAGNRRLPSPSRPGSGSRECPAHRVERRLRGNGWSSSA*