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SCNpilot_expt_1000_bf_scaffold_30_20

Organism: SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 29281..30177

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036BAC5A similarity UNIREF
DB: UNIREF100
  • Identity: 58.9
  • Coverage: 292.0
  • Bit_score: 377
  • Evalue 1.10e-101
  • rbh
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 57.1
  • Coverage: 289.0
  • Bit_score: 368
  • Evalue 2.80e-99
  • rbh
AraC protein arabinose-binding/dimerisation {ECO:0000313|EMBL:ACU04635.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.1
  • Coverage: 289.0
  • Bit_score: 368
  • Evalue 1.30e-98

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Taxonomy

Pedobacter heparinus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 897
ATGACCAACTATTACAAATACCTCCCTACCAGCGATGAAGATGAAAGTTGGGGATTGCATGTTTTAAATGCAGGATGTAACAGGATATGTAAAAATGAAATATATCCTTCTGTACAACATCCTTCGCACCATTATTTTACGTGGAACAAAGGAAGGATACTGGAAGAGTTCCAGATAATTTACATTGCTAAGGGTGAGGGCATTTTTGAATCTGCAGGCAACAGAAAAAGCATTGTAAGGGAGGGAACTATCCTGCTATTGTTCCCTGGTGAATGGCATCGTTTCAAGCCCAATATCAAAACAGGGTGGGATGAATACTGGGTGGGTTTTAAAGGTCCTATTATGGAAAACCTTGTGCAGCAAAAATTTTTTCATCAACGCAAACCCATATTGCATATCGGTATTCATGAAAGCGTTATCAACTTAATGCTGGAGATCATTGAAAAAACAAAAAATGAGAAAACGGGCTACCAGCCAATGGTAGCTGGCATTGTAATGCATCTGCTTGGGCAGATTCATACACTTGTGCGACAAAGCAATTTCAAAGCGGAAGATATTACTGAATCTATTATCAACAAGGCAAGGATCATTTTCAGAACACATATAGACCAGGAGATCACTATCGAAAATGTTGCCGAAGAGCTGAATGTAAGCTATGCCTGGTTTCGTAAAGCTTTTAAAGCATATTCAGGTATTGCTCCGCATCAATATCTTTTGCAGTTGAAAATTGAAAAAGCGAAGGAGCTTTTAGCAGATCCTTCTATGCAGATAAAAGAAGTTTCTTTCAGCCTGAATTTTAAGTCCACATTTTATTTTTCAAAACTGTTCAAAGAAAAAACCGGTAGCTCTCCTGCGGAATTCAGGAAAAAATGGAATATACAAAATGACCTTTTTTAA
PROTEIN sequence
Length: 299
MTNYYKYLPTSDEDESWGLHVLNAGCNRICKNEIYPSVQHPSHHYFTWNKGRILEEFQIIYIAKGEGIFESAGNRKSIVREGTILLLFPGEWHRFKPNIKTGWDEYWVGFKGPIMENLVQQKFFHQRKPILHIGIHESVINLMLEIIEKTKNEKTGYQPMVAGIVMHLLGQIHTLVRQSNFKAEDITESIINKARIIFRTHIDQEITIENVAEELNVSYAWFRKAFKAYSGIAPHQYLLQLKIEKAKELLADPSMQIKEVSFSLNFKSTFYFSKLFKEKTGSSPAEFRKKWNIQNDLF*