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SCNpilot_expt_1000_bf_scaffold_30_21

Organism: SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 30637..33765

Top 3 Functional Annotations

Value Algorithm Source
TonB-denpendent receptor n=1 Tax=Rudanella lutea RepID=UPI00035C0DE1 similarity UNIREF
DB: UNIREF100
  • Identity: 65.4
  • Coverage: 999.99
  • Bit_score: 1384
  • Evalue 0.0
  • rbh
TonB-dependent receptor plug {ECO:0000313|EMBL:AEI51835.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.9
  • Coverage: 999.99
  • Bit_score: 1349
  • Evalue 0.0
TonB-dependent receptor plug similarity KEGG
DB: KEGG
  • Identity: 62.9
  • Coverage: 999.99
  • Bit_score: 1349
  • Evalue 0.0
  • rbh

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Taxonomy

Runella slithyformis → Runella → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3129
ATGATCAAAAAGGATTATGCGGCCTCCGCAGGAGGTAAGCACATTGTGGCTTTTTTTATGGCAGTGCTCTTCAGTGCTGCTCTTTATGCCCAGCAAAATCTTACTATTTCGGGTAAGGTAGTTGCGGCGTCGAATGGAAACGCCTTATCGGGTGTAACCGTTACGGTTAAGGGCACACCCAACGGAACTGCTACAGATGAAGGGGGGCATTTCATTATTACCGCGCCCCGGGGAGCAATACTGGTTTTCAGCTCTGTGGGTTTTCAGAAAACTGAAGTGACAGCAAACAACAGCAACCTTAATATTCAGCTCATTGCCGCAGATAAAGGATTGGATGAAGTTGTGGTAATTGGTTACGGATCAAAAAGAAAAAGAGATATTACTGCAGCAGTATCCAATATTAATCTTGATGATCAGGGCGAGCTACCTTCAAGGAACGTAACACAAATGATACAGGGACAAGCTCCGGGTGTTGTAGCCACACAAAGAAACGGTACTCCCGGCGCCGAGTTTGAAGTCAGGATCAGAGGTATTGGTTCGATAGGTGCAGGTAGCAATCCTTTGTATGTTATTGATGGATTTGCAGTAGGTACCAGTGTCGGACAAAATCTTAACCCCAATGATATTCAGAGTATCTCAATTTTGAAAGATGCTGCCGCTACAGCTATTTATGGTGCACGAGGCTCTAATGGTGTGGTATTGATTACTACAAAATCTGCAAAAGAAGGACAAACAAACCTGAATTTATCTGTTGATTATGGTGTTCAGAATATTCCAAAATCAAGAAGAGTTAAAGTATTAAACGGACCTGAATTTGCTCAATTTTTAAAAGATGTGTATTCAGACAAAATAAGATATTTCGAAAACAGGGAGCCAAGCATTGATGAAATTCCTGAAGGATACCGTTACCCCGAACAAACTAAATATTCTACTGACTGGTTTAATGAAATACTACATAACAATGCTCCTTACACTGATGTAAATCTTACATTGTCATCAGGAAAAGGGGATATAAATTCTCTTCTGTCTTTTGGATATTACAAAGAAGAGGGAGCATTGAAAAATACAGGTTATGACCGTTTTTCAGCAAGAGCGAATATTTCTGGTAAAGTAAGGGATTTTATAACCCTGGGATTAAATGTTAACGGAAGTTATACAAGACAGGATATTGCGGCTACAGATGGCCGTGATGCTGTTGTCGGTTCAAGTTTGCTTGTTGATCCGCGAGAACCGGCGTACGATGAGAATGGAAATATAAGACCTTTTATTGGTGGTAAAGATGGTGTATTTGCTTATCCAAGTCCACTTTTCTTATTATATAATTACAAAAGACACAGAGATATAGCTGATGTTTTGTCAAATGCTTATATTGAAGTAGCTATCCTCAAGAATTTAAAGTTCCGTTCATCGCTCAATGTAAAACTTAACTATAATACATACAAAGAGTATAAACCTTCTACAATAGGTAGGGGACTTACCACGGGAACAACAGGAGCTCCTCCACAAATTGCTACAGCGGCAGAAATAAACGATCGTTTGCTTAATTATTCTGCGGATCAATTGCTTACTTATACACCAAATATAGGGGAAGATCATAAACTTGATTTCCTTGCAGGATTTACTTCCCAGGAAGAAACTGTTAAGCAAATCAGAGGAGATGCTAACACCTTTCCCGACGATCTTACCCCATTCCTTAATGCAGGAGCTATCCGTTCATCAAGTTCTCTGGAATATACATGGGCATTGATTGCATATATAGCCAGAGCAAATTATTCATTCAAAGATAAATATCTGATATCTGGTTCTTTTCGCAGAGAAGGGAGTTCCAGATTTTCTAAAGGATATCAATATGGAGATTTCCCATCAGCTTCTATTGGCTGGCGTATAAGCGGAGAGAACTTTATGTCGAATGTAAGTTGGTTGACAGATCTTAAGTTAAGAGCAAGCTATGGCAAAACCGGAAACAGTGATATTCCAAGTATAGTTAATTCGCCGCAAGGAGTGGGCAATTATATAAGCCTTCCATTTCTTACAACAAGCGGTTATATTCTCAATAATAGTTTTGCACCTGGCGTAATTGTATCATCATTCGCTAATAAGTCACTTCAATGGGAAAAATCAGACCAAACAAATATTGGTTTGGATATGGCGATATTGAACAATAGGGTAACATTAACTGCAGAATATTATAATAAGCTTACTAATGATATGCTTTTGCCGGTTAGCATACCTGCGGTTTCTGGTTTTACATCAAGCTATGCAAACGTAGGCCAGGTTAGAAACAGGGGAGTTGAAATTGCTGTTGGCTATAATGAACGTATAGGTAAATTAAACCTGAGAACAAGTGGAAATATCGCCTTTAACAGAAGCAGGGTAATGTCGATAAACGGTGCTAATGATATTCTTTGGTATGGCAGCTTTTATGGCGGTTATAACGTAAACAAAGTTGGCAGACCAATAGGCATGATCTATGGCTATGATAAGATCGGCATTTTTAACACACAGGATGAAATTGATCATGCGCCAAAGCAGGATGGTGTAATACCCGGCGGTATGAAATTCCGTGATGCTGATAGTAATGGAGAAATAACCTATGATACCAAAGACATGGTAGAAATAGGCAATCCTAATCCTAAGTTTACATGGGGCTTAACTATTGACATGGATTATAAAGGTTTCGATTTTAATATATTGTTCATGGGAGCGCAGGATTTTGATGTATACAGAAACATTGAAGCATCTACTATGAATATGGATGGTGTATTTAATGTGCTTGATAAAGCAAAAGACAGGTGGAGATCAGCAGAAAACCCCGGTACTAACCCTACCGATGTACATGCACAGGGCGGCACCAATTATTTTAAATGGTCGCGCGAAAGTAGCAACAGGTATGTATATGACGCAAGCTATGGTTGGGTAAAAGCAGCTACGCTTGGTTACACATTTGCGAAGACCAGATACTTCAATAATATCCGTGTTTTTGTAGGTGCCAACAATCTGTTCATCATTACCAACTATCCCGGTAACAATCCAGACGTAAGCCAGAGAAGTGGTACCCAATTAGGTAATGATGATGAAGCCTATCCTGTTCCCAGAACATTTTTTGTTGGCGCTAAATTTAACTTTTAA
PROTEIN sequence
Length: 1043
MIKKDYAASAGGKHIVAFFMAVLFSAALYAQQNLTISGKVVAASNGNALSGVTVTVKGTPNGTATDEGGHFIITAPRGAILVFSSVGFQKTEVTANNSNLNIQLIAADKGLDEVVVIGYGSKRKRDITAAVSNINLDDQGELPSRNVTQMIQGQAPGVVATQRNGTPGAEFEVRIRGIGSIGAGSNPLYVIDGFAVGTSVGQNLNPNDIQSISILKDAAATAIYGARGSNGVVLITTKSAKEGQTNLNLSVDYGVQNIPKSRRVKVLNGPEFAQFLKDVYSDKIRYFENREPSIDEIPEGYRYPEQTKYSTDWFNEILHNNAPYTDVNLTLSSGKGDINSLLSFGYYKEEGALKNTGYDRFSARANISGKVRDFITLGLNVNGSYTRQDIAATDGRDAVVGSSLLVDPREPAYDENGNIRPFIGGKDGVFAYPSPLFLLYNYKRHRDIADVLSNAYIEVAILKNLKFRSSLNVKLNYNTYKEYKPSTIGRGLTTGTTGAPPQIATAAEINDRLLNYSADQLLTYTPNIGEDHKLDFLAGFTSQEETVKQIRGDANTFPDDLTPFLNAGAIRSSSSLEYTWALIAYIARANYSFKDKYLISGSFRREGSSRFSKGYQYGDFPSASIGWRISGENFMSNVSWLTDLKLRASYGKTGNSDIPSIVNSPQGVGNYISLPFLTTSGYILNNSFAPGVIVSSFANKSLQWEKSDQTNIGLDMAILNNRVTLTAEYYNKLTNDMLLPVSIPAVSGFTSSYANVGQVRNRGVEIAVGYNERIGKLNLRTSGNIAFNRSRVMSINGANDILWYGSFYGGYNVNKVGRPIGMIYGYDKIGIFNTQDEIDHAPKQDGVIPGGMKFRDADSNGEITYDTKDMVEIGNPNPKFTWGLTIDMDYKGFDFNILFMGAQDFDVYRNIEASTMNMDGVFNVLDKAKDRWRSAENPGTNPTDVHAQGGTNYFKWSRESSNRYVYDASYGWVKAATLGYTFAKTRYFNNIRVFVGANNLFIITNYPGNNPDVSQRSGTQLGNDDEAYPVPRTFFVGAKFNF*