ggKbase home page

SCNpilot_expt_1000_bf_scaffold_410_14

Organism: SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 18014..18655

Top 3 Functional Annotations

Value Algorithm Source
Putative two-component response regulator {ECO:0000313|EMBL:GAO42664.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.6
  • Coverage: 209.0
  • Bit_score: 317
  • Evalue 1.40e-83
Response regulator id=3008735 bin=GWF2_Bacteroidetes_41_31 species=Mariniradius saccharolyticus genus=Mariniradius taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes similarity UNIREF
DB: UNIREF100
  • Identity: 58.3
  • Coverage: 211.0
  • Bit_score: 251
  • Evalue 6.80e-64
putative transcriptional regulatory protein yxjL similarity KEGG
DB: KEGG
  • Identity: 44.9
  • Coverage: 214.0
  • Bit_score: 191
  • Evalue 2.00e-46

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavihumibacter petaseus → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 642
ATGACTAATAAGCTAATACGGGTTTTATTGTATGATGATGCTGACCAGTTCAGGGAAGCGATCACGCTTTTATTAGACCAGGCGGAAGGATTTGAAGTGGTGGGAAATTTCAATAATTGTGAAACCGCGGTAGCGGATATTGAAATGTTGAAGCCGGATGTGATACTGATGGATATTGATATGCCGGGCGCTACGGGCATAGATGGTGTACGGATGATCCGTCAAAAAAATCTTACGGTAAAGATCATAATGCTTACTGTTTTCGACAATAATAAAAATATTTATGATGCCATCCGCTTTGGGGCAAATGGTTATGTGCTGAAGAAAAGTACACCGGATACTATTATCAATGCCATAAAAGATGTAAATGATGGTGGCGCTCCCATGAATTCATCTATCGCAACACAGGTATTGCAAATGTTTGCCGGCATGTCGCCGGGCACTCAAAACTATGGTCTTTCAGAAAAAGAAAAGCAGGTGTTGAAATCACTGGTAGATGGCAACAGTTATAAAATGGTAGCCTCATCACTTAATATTTCTATTGATACCGTTCGCTCTCACATACGAAGCATTTATGAAAAGCTACAGGTAAATTCTAAAAGCGCCGCAGTGGCCAAGGCGTTGAAAGACCGCATCCTTTAA
PROTEIN sequence
Length: 214
MTNKLIRVLLYDDADQFREAITLLLDQAEGFEVVGNFNNCETAVADIEMLKPDVILMDIDMPGATGIDGVRMIRQKNLTVKIIMLTVFDNNKNIYDAIRFGANGYVLKKSTPDTIINAIKDVNDGGAPMNSSIATQVLQMFAGMSPGTQNYGLSEKEKQVLKSLVDGNSYKMVASSLNISIDTVRSHIRSIYEKLQVNSKSAAVAKALKDRIL*