ggKbase home page

SCNpilot_expt_1000_bf_scaffold_214_22

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 25211..27253

Top 3 Functional Annotations

Value Algorithm Source
Oligopeptide transporter, OPT family n=1 Tax=Niabella soli DSM 19437 RepID=H1NPZ9_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 72.6
  • Coverage: 678.0
  • Bit_score: 967
  • Evalue 7.70e-279
Peptide transporter {ECO:0000313|EMBL:KEQ31657.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.4
  • Coverage: 683.0
  • Bit_score: 970
  • Evalue 9.70e-280
oligopeptide transporter similarity KEGG
DB: KEGG
  • Identity: 70.4
  • Coverage: 685.0
  • Bit_score: 951
  • Evalue 1.40e-274

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedobacter antarcticus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 2043
ATGTCAGAAAAAAGCTTTCGCCCTTTCATTGCACCTGAAACCAGGATGGCAGAATTTACCGTCAAAGCTGTTGTGACGGGCGCTGTTTTCGGGATCATCTTTGGCGCCGCCACCGTATACCTGGCGCTCAAAGCAGGGCTCACCGTATCTGCATCCATTCCTATTGCAGTGATGGCAATAACATTGAGCCGGGCTTTCCTGAAAACAACCATTCTTGAGAATAATATCATACAAACAACAGGATCGGCCGGCGAGAGCATAGCTGCCGGAGTGGTATTTACGCTGCCCGGTTTTTTATTTCTCAGCGATAAGGCAAATGCAGATTATTTTAATTACGTAACTATCCTTACACTGGCTGTGCTTGGCGGCATATTGGGCACATTAATGATGATACCGCTTCGTCGCCCGTTGATAGTAAAAGAACACGATGCTTTACCCTATCCCGAAGGTACTGCCTGCGCTTCCGTATTAAAAGCCGGCGAAAAGGGAGGAGATGTAGCCAAAACCGCATTTGCCGGACTGGGGTTTGCTTTGCTGTATGCGTTGCTCCAGAAAATATTACATGTCATTGCAGAAACGCCCGAATTTATGACCAGGCAGGTAAATAAGTTTCTACCCTCTGCAAAGATCAGTGGTGAGATCACGCCTGAGTATCTGGGTGTGGGGTATATTATCGGGCCAAAAATTGGCGGGGTGCTCGTTGCCGGTAGTGTGCTGGCTTCTTTTGCACTTGTGCCCCTGCTCGCCACGCTGGTGCCTCCTGATGCCATTGCCGGGCAGCTCGTAAAGCTCGGGCTGCTGGACGATATCTCCAAAGCAGGAGGACGGGGCGGATGGAATCCCGACACGCAGAGCTTTAATGATTTTTCTACGGCAATATACTGGGCATATATCAGGCAGATAGGCGCCGGCGCAGTGGCGGCAGGAGGGTTCATCACATTATTAAAAACCCTGCCCACCATTATTTCCTCCTTCAAAAGCAGCGTAGGCTCTCTTAAAGGCAGGGGAGAAGAAGCCCAGGCACAACTGCGCACGGAAAAAGACCTGAGCATAAAAGTCGTGGGATTTGGCAGCCTGGCATTGGTGCTGATCGTATCCGCATTACCATTTATTCCCGGAGATAATTTTTTCAGCCGGCTGCTGGTAGGACTTCTCATCGTGGTATTCGGTGCCTTATTTGTGACCGTATCCTCCAGGATCGTCGGGCTCATCGGCTCTTCCAACAATCCCATCTCGGGCATGACCATCGCTACCATCCTCGGCACCTGCCTGATCTTCATCGCAGTGGGCTGGACAGGGAGCGCCTATGAACCTATGGTGCTCGTGGTAGGCGGTATGATCTGTATTGCTGCAGCCAATGCCGGCGCAACCTCCCAGGATCTTAAAACAGGGTATATCGTTGGCGCCACGCCGCGCTACCAGCAGATGGCATTGTTCATCGGGGCAATTGTTTCTTCGCTGGCTATCGGCGTTACCATTAAAGTACTTGATACACCAACACCCGAAATGCTGGCACAGGGTATCCATCACGCTATTGGTCAAACTACCTATGCCGCACCACAGGCAACGTTGATGGCTACCCTCATTAAGGGAGTATTATCGTTTAACCTTGACTGGCAGTATGTGCTCGTTGGCGTATTCATCGCTATTGTGGTGGAGCTCTGTGGTATAAAAGCATTGTCGTTTGCCATCGGTTTGTATCTTCCGCTGGCGACCACGCTGCCTATATTCATTGGGGGCGCTATAAGAGGGCTTGTTGACTGGCAGCAAAAAAGAAAAGGAGAATATACAACGCCTGAGGAGGAAGACCTGGGCAAAGGTAACCTGTTTGCTACCGGGCTTGTCGCCGGCGGCGCCATTGCCGGAGTGATCGTAGCCTTCCTGTCGGTAAACGGCACTATTGCAAAAGCGCTGGCTAAGATCAACCTGGAAGAAGCGTTGAGCAGCATGCTGGGCGGCGCATTAGGGTATGAGATCCTCGGTGTGCTGTTCTTTGCGGCACTGGGCTTGCTGCTTTATCGCGTGGCGGGACGTGAGAGGTGA
PROTEIN sequence
Length: 681
MSEKSFRPFIAPETRMAEFTVKAVVTGAVFGIIFGAATVYLALKAGLTVSASIPIAVMAITLSRAFLKTTILENNIIQTTGSAGESIAAGVVFTLPGFLFLSDKANADYFNYVTILTLAVLGGILGTLMMIPLRRPLIVKEHDALPYPEGTACASVLKAGEKGGDVAKTAFAGLGFALLYALLQKILHVIAETPEFMTRQVNKFLPSAKISGEITPEYLGVGYIIGPKIGGVLVAGSVLASFALVPLLATLVPPDAIAGQLVKLGLLDDISKAGGRGGWNPDTQSFNDFSTAIYWAYIRQIGAGAVAAGGFITLLKTLPTIISSFKSSVGSLKGRGEEAQAQLRTEKDLSIKVVGFGSLALVLIVSALPFIPGDNFFSRLLVGLLIVVFGALFVTVSSRIVGLIGSSNNPISGMTIATILGTCLIFIAVGWTGSAYEPMVLVVGGMICIAAANAGATSQDLKTGYIVGATPRYQQMALFIGAIVSSLAIGVTIKVLDTPTPEMLAQGIHHAIGQTTYAAPQATLMATLIKGVLSFNLDWQYVLVGVFIAIVVELCGIKALSFAIGLYLPLATTLPIFIGGAIRGLVDWQQKRKGEYTTPEEEDLGKGNLFATGLVAGGAIAGVIVAFLSVNGTIAKALAKINLEEALSSMLGGALGYEILGVLFFAALGLLLYRVAGRER*