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SCNpilot_expt_1000_bf_scaffold_349_21

Organism: SCNPILOT_EXPT_1000_BF_Niastella_43_130

near complete RP 53 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(25339..26421)

Top 3 Functional Annotations

Value Algorithm Source
Anti-FecI sigma factor, FecR n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TH53_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 39.9
  • Coverage: 386.0
  • Bit_score: 250
  • Evalue 1.90e-63
anti-FecI sigma factor FecR similarity KEGG
DB: KEGG
  • Identity: 39.9
  • Coverage: 386.0
  • Bit_score: 250
  • Evalue 6.10e-64
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:AEW00664.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.9
  • Coverage: 386.0
  • Bit_score: 250
  • Evalue 2.70e-63

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1083
ATGGATCAACAACGTTTCTGGGAACTGGTAAGTTTAAAGCTGAGCGGTGAGGCTGCCGATGAAGAATTGCTGGAGCTGGACAGGCTAAAGCAACAATATCCCGAAACTGCATTAAAGCTTGATATAATTTTCGGGATATGGAAAGAAAACTCTCCTCCCCGGGAACCGGCTCTTTCATTCAGCGCCCACCTGGCAAGATTAAAACAGGCGGAGGTTTTACCGGAAGAAATACAGCCTGCCGGTGAGCAGGCGCCCGTGATGCTGCCTGTTGCAAAAATCAAAAAAAGGTGGTTCTACTACCTGGCAGCGGCAGGTAGTGTGATAATATTTTTCCTGGGCTGGATCTATTTTTATAACGGAACGCATCACATAGAAGGAAAGAATAAGGTAGCCAATATTATTGCCACACAAAGAGGGTCGAGGACTACTGTACAATTGTCTGATGGCACAAAAGTATGGCTCAATGCGGACAGCAAAATATATTATGACGAAGCCTTTAAAAGCAATGTGCGTGAAGTGCAACTGGAAGGTGAGGCTTTCTTTGATGTAAAGAAGGACTCCTCCAGGCCTTTTATCATTCACACAAGTGTTATAGATATCAAAGTTTTGGGCACCCGCTTTAATGTAAAGTCGTATAAGAATGAAAACGAAACAGAAACAGCCCTGATCAGCGGCAGGGTAGAGATCAGCATTAAAGGCAGTCCTGAAAAGAAAATCATTCTGAGACCTAATGAAAAGCTGATAGTAAAGCATCCCGCCTCTTCCGGTACTGTTGAAAGTGGCAATGCGCTGCTGGTGGTAAAAGCCCTCAGGAAAAACCCTGTGTATAAAAGCAACCCTGAAATTTTGTGGATGGACAACAAGCTGGTCTTTGATGGGGAAACCCTTGAAGCAGTATGTAAAAAGCTGGAGCGTTGGTATAATGTCAAAATTACCATACAGGATGAAAGCCTGAAAAAAGGCGCATATACTGCCATTTTTGACGGGGAAACATTAGAGAATGTATTGACGGCTTTAAAAATAACCGATGGCATTGATTTCAGCATTCACAATAATGAAGTGCTCATTTTTACAAAAAAATAA
PROTEIN sequence
Length: 361
MDQQRFWELVSLKLSGEAADEELLELDRLKQQYPETALKLDIIFGIWKENSPPREPALSFSAHLARLKQAEVLPEEIQPAGEQAPVMLPVAKIKKRWFYYLAAAGSVIIFFLGWIYFYNGTHHIEGKNKVANIIATQRGSRTTVQLSDGTKVWLNADSKIYYDEAFKSNVREVQLEGEAFFDVKKDSSRPFIIHTSVIDIKVLGTRFNVKSYKNENETETALISGRVEISIKGSPEKKIILRPNEKLIVKHPASSGTVESGNALLVVKALRKNPVYKSNPEILWMDNKLVFDGETLEAVCKKLERWYNVKITIQDESLKKGAYTAIFDGETLENVLTALKITDGIDFSIHNNEVLIFTKK*